## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Li1-CRR995068.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Li1-CRR995068.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Li1-CRR995068.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:14 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	24085011	0	0	3299294	2254370	0.136985	220707340

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.097743
2.0	2.081999
3.0	2.964499
4.0	3.755763
5.0	4.465225
6.0	5.10134
7.0	5.671691
8.0	6.183078
9.0	6.641597
10.0	7.052712
11.0	7.421325
12.0	7.75183
13.0	8.048166
14.0	8.313866
15.0	8.552097
16.0	8.765699
17.0	8.957218
18.0	9.128938
19.0	9.282904
20.0	9.420953
21.0	9.54473
22.0	9.655711
23.0	9.755218
24.0	9.844438
25.0	9.924434
26.0	9.99616
27.0	10.06047
28.0	10.118132
29.0	10.169833
30.0	10.216189
31.0	10.257752
32.0	10.295018
33.0	10.328432
34.0	10.358391
35.0	10.385253
36.0	10.409338
37.0	10.430933
38.0	10.450296
39.0	10.467656
40.0	10.483222
41.0	10.497179
42.0	10.509692
43.0	10.520912
44.0	10.530972
45.0	10.539993
46.0	10.54808
47.0	10.555331
48.0	10.561833
49.0	10.567663
50.0	10.57289
51.0	10.577576
52.0	10.581778
53.0	10.585546
54.0	10.588924
55.0	10.591953
56.0	10.594668
57.0	10.597103
58.0	10.599287
59.0	10.601244
60.0	10.602999
61.0	10.604573
62.0	10.605984
63.0	10.607249
64.0	10.608383
65.0	10.6094
66.0	10.610312
67.0	10.61113
68.0	10.611863
69.0	10.61252
70.0	10.61311
71.0	10.613638
72.0	10.614112
73.0	10.614537
74.0	10.614918
75.0	10.615259
76.0	10.615565
77.0	10.61584
78.0	10.616086
79.0	10.616307
80.0	10.616505
81.0	10.616682
82.0	10.616841
83.0	10.616984
84.0	10.617112
85.0	10.617227
86.0	10.617329
87.0	10.617422
88.0	10.617504
89.0	10.617578
90.0	10.617645
91.0	10.617704
92.0	10.617758
93.0	10.617806
94.0	10.617849
95.0	10.617887
96.0	10.617922
97.0	10.617953
98.0	10.61798
99.0	10.618005
100.0	10.618028