## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Br3-CRR995067.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Br3-CRR995067.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Br3-CRR995067.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:10 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	13748374	0	0	5927410	3716287	0.431135	19274444

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.256808
2.0	1.872678
3.0	2.17447
4.0	2.322357
5.0	2.394825
6.0	2.430336
7.0	2.447738
8.0	2.456265
9.0	2.460444
10.0	2.462491
11.0	2.463495
12.0	2.463986
13.0	2.464227
14.0	2.464345
15.0	2.464403
16.0	2.464432
17.0	2.464446
18.0	2.464452
19.0	2.464456
20.0	2.464457
21.0	2.464458
22.0	2.464458
23.0	2.464459
24.0	2.464459
25.0	2.464459
26.0	2.464459
27.0	2.464459
28.0	2.464459
29.0	2.464459
30.0	2.464459
31.0	2.464459
32.0	2.464459
33.0	2.464459
34.0	2.464459
35.0	2.464459
36.0	2.464459
37.0	2.464459
38.0	2.464459
39.0	2.464459
40.0	2.464459
41.0	2.464459
42.0	2.464459
43.0	2.464459
44.0	2.464459
45.0	2.464459
46.0	2.464459
47.0	2.464459
48.0	2.464459
49.0	2.464459
50.0	2.464459
51.0	2.464459
52.0	2.464459
53.0	2.464459
54.0	2.464459
55.0	2.464459
56.0	2.464459
57.0	2.464459
58.0	2.464459
59.0	2.464459
60.0	2.464459
61.0	2.464459
62.0	2.464459
63.0	2.464459
64.0	2.464459
65.0	2.464459
66.0	2.464459
67.0	2.464459
68.0	2.464459
69.0	2.464459
70.0	2.464459
71.0	2.464459
72.0	2.464459
73.0	2.464459
74.0	2.464459
75.0	2.464459
76.0	2.464459
77.0	2.464459
78.0	2.464459
79.0	2.464459
80.0	2.464459
81.0	2.464459
82.0	2.464459
83.0	2.464459
84.0	2.464459
85.0	2.464459
86.0	2.464459
87.0	2.464459
88.0	2.464459
89.0	2.464459
90.0	2.464459
91.0	2.464459
92.0	2.464459
93.0	2.464459
94.0	2.464459
95.0	2.464459
96.0	2.464459
97.0	2.464459
98.0	2.464459
99.0	2.464459
100.0	2.464459