## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB70_Br2-CRR995066.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB70_Br2-CRR995066.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB70_Br2-CRR995066.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:09 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14113786	0	0	2232755	1874395	0.158197	204911434

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.147939
2.0	2.219472
3.0	3.219685
4.0	4.153324
5.0	5.024822
6.0	5.838314
7.0	6.59766
8.0	7.306465
9.0	7.968093
10.0	8.585684
11.0	9.162168
12.0	9.700282
13.0	10.20258
14.0	10.671446
15.0	11.109104
16.0	11.517632
17.0	11.898969
18.0	12.254924
19.0	12.587188
20.0	12.897336
21.0	13.186841
22.0	13.457077
23.0	13.709327
24.0	13.944787
25.0	14.164575
26.0	14.369734
27.0	14.561238
28.0	14.739995
29.0	14.906855
30.0	15.062609
31.0	15.207996
32.0	15.343706
33.0	15.470383
34.0	15.588629
35.0	15.699004
36.0	15.802033
37.0	15.898205
38.0	15.987975
39.0	16.071771
40.0	16.149989
41.0	16.223001
42.0	16.291153
43.0	16.354769
44.0	16.414151
45.0	16.469581
46.0	16.521321
47.0	16.569618
48.0	16.6147
49.0	16.656781
50.0	16.696061
51.0	16.732727
52.0	16.766953
53.0	16.7989
54.0	16.828721
55.0	16.856558
56.0	16.882541
57.0	16.906795
58.0	16.929435
59.0	16.950568
60.0	16.970294
61.0	16.988707
62.0	17.005895
63.0	17.021939
64.0	17.036915
65.0	17.050894
66.0	17.063942
67.0	17.076123
68.0	17.087492
69.0	17.098105
70.0	17.108011
71.0	17.117258
72.0	17.12589
73.0	17.133947
74.0	17.141467
75.0	17.148488
76.0	17.15504
77.0	17.161157
78.0	17.166867
79.0	17.172197
80.0	17.177171
81.0	17.181815
82.0	17.18615
83.0	17.190196
84.0	17.193973
85.0	17.197498
86.0	17.200789
87.0	17.203861
88.0	17.206728
89.0	17.209405
90.0	17.211903
91.0	17.214235
92.0	17.216412
93.0	17.218444
94.0	17.220341
95.0	17.222111
96.0	17.223764
97.0	17.225306
98.0	17.226746
99.0	17.22809
100.0	17.229345