## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB40_Pl1-CRR995062.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB40_Pl1-CRR995062.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB40_Pl1-CRR995062.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:13 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	18399847	0	0	5979217	4820214	0.32496	74959864

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.313587
2.0	2.341262
3.0	3.145255
4.0	3.774254
5.0	4.266346
6.0	4.651331
7.0	4.952521
8.0	5.188154
9.0	5.3725
10.0	5.516722
11.0	5.629553
12.0	5.717826
13.0	5.786885
14.0	5.840913
15.0	5.883181
16.0	5.91625
17.0	5.94212
18.0	5.96236
19.0	5.978195
20.0	5.990583
21.0	6.000274
22.0	6.007856
23.0	6.013788
24.0	6.018429
25.0	6.02206
26.0	6.0249
27.0	6.027122
28.0	6.028861
29.0	6.030221
30.0	6.031285
31.0	6.032117
32.0	6.032769
33.0	6.033278
34.0	6.033677
35.0	6.033989
36.0	6.034233
37.0	6.034424
38.0	6.034573
39.0	6.03469
40.0	6.034781
41.0	6.034853
42.0	6.034909
43.0	6.034952
44.0	6.034987
45.0	6.035013
46.0	6.035034
47.0	6.035051
48.0	6.035064
49.0	6.035074
50.0	6.035081
51.0	6.035088
52.0	6.035092
53.0	6.035096
54.0	6.035099
55.0	6.035101
56.0	6.035103
57.0	6.035105
58.0	6.035106
59.0	6.035107
60.0	6.035107
61.0	6.035108
62.0	6.035108
63.0	6.035108
64.0	6.035109
65.0	6.035109
66.0	6.035109
67.0	6.035109
68.0	6.035109
69.0	6.035109
70.0	6.035109
71.0	6.035109
72.0	6.03511
73.0	6.03511
74.0	6.03511
75.0	6.03511
76.0	6.03511
77.0	6.03511
78.0	6.03511
79.0	6.03511
80.0	6.03511
81.0	6.03511
82.0	6.03511
83.0	6.03511
84.0	6.03511
85.0	6.03511
86.0	6.03511
87.0	6.03511
88.0	6.03511
89.0	6.03511
90.0	6.03511
91.0	6.03511
92.0	6.03511
93.0	6.03511
94.0	6.03511
95.0	6.03511
96.0	6.03511
97.0	6.03511
98.0	6.03511
99.0	6.03511
100.0	6.03511