## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB40_Br1-CRR995053.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB40_Br1-CRR995053.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB40_Br1-CRR995053.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:13 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14933124	0	0	4129734	3539508	0.276549	106138550

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.289429
2.0	2.409626
3.0	3.382802
4.0	4.228253
5.0	4.962743
6.0	5.600834
7.0	6.155179
8.0	6.636768
9.0	7.055151
10.0	7.418624
11.0	7.734392
12.0	8.008717
13.0	8.247038
14.0	8.45408
15.0	8.63395
16.0	8.790212
17.0	8.925965
18.0	9.043902
19.0	9.146359
20.0	9.23537
21.0	9.312699
22.0	9.379878
23.0	9.43824
24.0	9.488943
25.0	9.532991
26.0	9.571258
27.0	9.604503
28.0	9.633384
29.0	9.658475
30.0	9.680273
31.0	9.69921
32.0	9.715662
33.0	9.729954
34.0	9.742371
35.0	9.753158
36.0	9.762529
37.0	9.77067
38.0	9.777743
39.0	9.783887
40.0	9.789225
41.0	9.793863
42.0	9.797892
43.0	9.801392
44.0	9.804432
45.0	9.807074
46.0	9.809369
47.0	9.811363
48.0	9.813095
49.0	9.814599
50.0	9.815907
51.0	9.817042
52.0	9.818029
53.0	9.818886
54.0	9.819631
55.0	9.820278
56.0	9.82084
57.0	9.821328
58.0	9.821752
59.0	9.822121
60.0	9.822441
61.0	9.822719
62.0	9.82296
63.0	9.82317
64.0	9.823353
65.0	9.823511
66.0	9.823649
67.0	9.823768
68.0	9.823872
69.0	9.823962
70.0	9.824041
71.0	9.824109
72.0	9.824168
73.0	9.824219
74.0	9.824264
75.0	9.824303
76.0	9.824337
77.0	9.824366
78.0	9.824391
79.0	9.824413
80.0	9.824433
81.0	9.824449
82.0	9.824464
83.0	9.824476
84.0	9.824487
85.0	9.824497
86.0	9.824505
87.0	9.824512
88.0	9.824518
89.0	9.824524
90.0	9.824529
91.0	9.824533
92.0	9.824536
93.0	9.824539
94.0	9.824542
95.0	9.824544
96.0	9.824546
97.0	9.824548
98.0	9.82455
99.0	9.824551
100.0	9.824552