## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB168_H_Li3-CRR995051.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB168_H_Li3-CRR995051.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB168_H_Li3-CRR995051.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:09 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	23355199	0	0	3388117	2065280	0.145069	164148757

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.090283
2.0	2.035971
3.0	2.856239
4.0	3.567722
5.0	4.184846
6.0	4.720125
7.0	5.184415
8.0	5.58713
9.0	5.936435
10.0	6.239415
11.0	6.502213
12.0	6.730159
13.0	6.927873
14.0	7.099366
15.0	7.248116
16.0	7.377138
17.0	7.489049
18.0	7.586117
19.0	7.670313
20.0	7.743342
21.0	7.806686
22.0	7.861629
23.0	7.909286
24.0	7.950622
25.0	7.986476
26.0	8.017575
27.0	8.044549
28.0	8.067946
29.0	8.088241
30.0	8.105843
31.0	8.121111
32.0	8.134355
33.0	8.145842
34.0	8.155805
35.0	8.164447
36.0	8.171943
37.0	8.178445
38.0	8.184085
39.0	8.188976
40.0	8.193219
41.0	8.196899
42.0	8.200092
43.0	8.20286
44.0	8.205262
45.0	8.207345
46.0	8.209152
47.0	8.210719
48.0	8.212078
49.0	8.213257
50.0	8.21428
51.0	8.215167
52.0	8.215937
53.0	8.216604
54.0	8.217183
55.0	8.217685
56.0	8.21812
57.0	8.218498
58.0	8.218826
59.0	8.21911
60.0	8.219357
61.0	8.21957
62.0	8.219756
63.0	8.219917
64.0	8.220056
65.0	8.220177
66.0	8.220282
67.0	8.220373
68.0	8.220452
69.0	8.220521
70.0	8.22058
71.0	8.220632
72.0	8.220676
73.0	8.220715
74.0	8.220749
75.0	8.220778
76.0	8.220803
77.0	8.220825
78.0	8.220844
79.0	8.220861
80.0	8.220875
81.0	8.220887
82.0	8.220898
83.0	8.220908
84.0	8.220916
85.0	8.220923
86.0	8.220929
87.0	8.220934
88.0	8.220939
89.0	8.220943
90.0	8.220946
91.0	8.220949
92.0	8.220952
93.0	8.220954
94.0	8.220956
95.0	8.220958
96.0	8.220959
97.0	8.22096
98.0	8.220962
99.0	8.220962
100.0	8.220963