## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB168_F_Li2-CRR995045.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB168_F_Li2-CRR995045.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB168_F_Li2-CRR995045.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:12 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	16163635	0	0	2136700	1308111	0.132192	128170823

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.082629
2.0	2.036985
3.0	2.878267
4.0	3.619873
5.0	4.273611
6.0	4.849893
7.0	5.357895
8.0	5.805709
9.0	6.200464
10.0	6.548448
11.0	6.855202
12.0	7.125612
13.0	7.363982
14.0	7.57411
15.0	7.759341
16.0	7.922626
17.0	8.066565
18.0	8.193449
19.0	8.3053
20.0	8.403898
21.0	8.490814
22.0	8.567433
23.0	8.634973
24.0	8.694511
25.0	8.746995
26.0	8.79326
27.0	8.834044
28.0	8.869996
29.0	8.901688
30.0	8.929625
31.0	8.954252
32.0	8.975961
33.0	8.995098
34.0	9.011968
35.0	9.026838
36.0	9.039947
37.0	9.051503
38.0	9.06169
39.0	9.070669
40.0	9.078585
41.0	9.085563
42.0	9.091714
43.0	9.097136
44.0	9.101916
45.0	9.10613
46.0	9.109844
47.0	9.113118
48.0	9.116005
49.0	9.118549
50.0	9.120792
51.0	9.122769
52.0	9.124512
53.0	9.126048
54.0	9.127403
55.0	9.128596
56.0	9.129649
57.0	9.130577
58.0	9.131394
59.0	9.132115
60.0	9.132751
61.0	9.133311
62.0	9.133805
63.0	9.13424
64.0	9.134624
65.0	9.134962
66.0	9.13526
67.0	9.135523
68.0	9.135755
69.0	9.135959
70.0	9.136139
71.0	9.136298
72.0	9.136438
73.0	9.136561
74.0	9.13667
75.0	9.136766
76.0	9.13685
77.0	9.136925
78.0	9.13699
79.0	9.137048
80.0	9.137099
81.0	9.137144
82.0	9.137184
83.0	9.137219
84.0	9.13725
85.0	9.137277
86.0	9.137301
87.0	9.137322
88.0	9.137341
89.0	9.137357
90.0	9.137371
91.0	9.137384
92.0	9.137395
93.0	9.137405
94.0	9.137414
95.0	9.137422
96.0	9.137428
97.0	9.137434
98.0	9.13744
99.0	9.137444
100.0	9.137448