## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB115_Li3-CRR995040.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB115_Li3-CRR995040.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB115_Li3-CRR995040.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:08 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	19401920	0	0	4603739	3512142	0.237283	110289819

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.202254
2.0	2.210569
3.0	3.056229
4.0	3.765474
5.0	4.360309
6.0	4.859188
7.0	5.277593
8.0	5.628503
9.0	5.922807
10.0	6.169635
11.0	6.376647
12.0	6.550266
13.0	6.695877
14.0	6.818
15.0	6.920422
16.0	7.006323
17.0	7.078367
18.0	7.138789
19.0	7.189464
20.0	7.231964
21.0	7.267609
22.0	7.297504
23.0	7.322576
24.0	7.343604
25.0	7.36124
26.0	7.376031
27.0	7.388436
28.0	7.39884
29.0	7.407565
30.0	7.414883
31.0	7.421021
32.0	7.426168
33.0	7.430485
34.0	7.434106
35.0	7.437143
36.0	7.43969
37.0	7.441826
38.0	7.443617
39.0	7.445119
40.0	7.44638
41.0	7.447436
42.0	7.448323
43.0	7.449066
44.0	7.449689
45.0	7.450212
46.0	7.450651
47.0	7.451019
48.0	7.451327
49.0	7.451586
50.0	7.451803
51.0	7.451985
52.0	7.452137
53.0	7.452265
54.0	7.452373
55.0	7.452463
56.0	7.452538
57.0	7.452602
58.0	7.452655
59.0	7.452699
60.0	7.452737
61.0	7.452768
62.0	7.452794
63.0	7.452816
64.0	7.452835
65.0	7.45285
66.0	7.452863
67.0	7.452874
68.0	7.452883
69.0	7.452891
70.0	7.452897
71.0	7.452903
72.0	7.452907
73.0	7.452911
74.0	7.452914
75.0	7.452917
76.0	7.452919
77.0	7.452921
78.0	7.452923
79.0	7.452924
80.0	7.452925
81.0	7.452926
82.0	7.452927
83.0	7.452927
84.0	7.452928
85.0	7.452928
86.0	7.452929
87.0	7.452929
88.0	7.452929
89.0	7.45293
90.0	7.45293
91.0	7.45293
92.0	7.45293
93.0	7.45293
94.0	7.45293
95.0	7.45293
96.0	7.45293
97.0	7.452931
98.0	7.452931
99.0	7.452931
100.0	7.452931