## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB115_Li2-CRR995039.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB115_Li2-CRR995039.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB115_Li2-CRR995039.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:08 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	25844274	0	0	7743404	5312908	0.299618	79730226

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.219487
2.0	2.101351
3.0	2.739067
4.0	3.200227
5.0	3.533713
6.0	3.774871
7.0	3.949263
8.0	4.075373
9.0	4.16657
10.0	4.232518
11.0	4.280208
12.0	4.314694
13.0	4.339633
14.0	4.357667
15.0	4.370709
16.0	4.38014
17.0	4.38696
18.0	4.391891
19.0	4.395458
20.0	4.398037
21.0	4.399902
22.0	4.40125
23.0	4.402226
24.0	4.402931
25.0	4.403441
26.0	4.40381
27.0	4.404077
28.0	4.404269
29.0	4.404409
30.0	4.40451
31.0	4.404583
32.0	4.404635
33.0	4.404674
34.0	4.404701
35.0	4.404721
36.0	4.404735
37.0	4.404746
38.0	4.404753
39.0	4.404759
40.0	4.404763
41.0	4.404766
42.0	4.404768
43.0	4.404769
44.0	4.40477
45.0	4.404771
46.0	4.404772
47.0	4.404772
48.0	4.404772
49.0	4.404773
50.0	4.404773
51.0	4.404773
52.0	4.404773
53.0	4.404773
54.0	4.404773
55.0	4.404773
56.0	4.404773
57.0	4.404773
58.0	4.404773
59.0	4.404773
60.0	4.404773
61.0	4.404773
62.0	4.404773
63.0	4.404773
64.0	4.404773
65.0	4.404773
66.0	4.404773
67.0	4.404773
68.0	4.404773
69.0	4.404773
70.0	4.404773
71.0	4.404773
72.0	4.404773
73.0	4.404773
74.0	4.404773
75.0	4.404773
76.0	4.404773
77.0	4.404773
78.0	4.404773
79.0	4.404773
80.0	4.404773
81.0	4.404773
82.0	4.404773
83.0	4.404773
84.0	4.404773
85.0	4.404773
86.0	4.404773
87.0	4.404773
88.0	4.404773
89.0	4.404773
90.0	4.404773
91.0	4.404773
92.0	4.404773
93.0	4.404773
94.0	4.404773
95.0	4.404773
96.0	4.404773
97.0	4.404773
98.0	4.404773
99.0	4.404773
100.0	4.404773