## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB115_Li1-CRR995038.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB115_Li1-CRR995038.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB115_Li1-CRR995038.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:08 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	21582344	0	0	6613383	4266798	0.306426	57973475

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.20385
2.0	2.033498
3.0	2.605258
4.0	2.999294
5.0	3.270848
6.0	3.457993
7.0	3.586966
8.0	3.675849
9.0	3.737104
10.0	3.779318
11.0	3.808411
12.0	3.828461
13.0	3.842278
14.0	3.8518
15.0	3.858363
16.0	3.862885
17.0	3.866002
18.0	3.86815
19.0	3.86963
20.0	3.870651
21.0	3.871354
22.0	3.871838
23.0	3.872172
24.0	3.872402
25.0	3.872561
26.0	3.87267
27.0	3.872745
28.0	3.872797
29.0	3.872833
30.0	3.872858
31.0	3.872875
32.0	3.872886
33.0	3.872895
34.0	3.8729
35.0	3.872904
36.0	3.872907
37.0	3.872908
38.0	3.87291
39.0	3.872911
40.0	3.872911
41.0	3.872912
42.0	3.872912
43.0	3.872912
44.0	3.872912
45.0	3.872912
46.0	3.872912
47.0	3.872912
48.0	3.872912
49.0	3.872912
50.0	3.872912
51.0	3.872912
52.0	3.872912
53.0	3.872912
54.0	3.872912
55.0	3.872912
56.0	3.872912
57.0	3.872912
58.0	3.872912
59.0	3.872912
60.0	3.872912
61.0	3.872912
62.0	3.872912
63.0	3.872912
64.0	3.872912
65.0	3.872912
66.0	3.872912
67.0	3.872912
68.0	3.872912
69.0	3.872912
70.0	3.872912
71.0	3.872912
72.0	3.872912
73.0	3.872912
74.0	3.872912
75.0	3.872912
76.0	3.872912
77.0	3.872912
78.0	3.872912
79.0	3.872912
80.0	3.872912
81.0	3.872912
82.0	3.872912
83.0	3.872912
84.0	3.872912
85.0	3.872912
86.0	3.872912
87.0	3.872912
88.0	3.872912
89.0	3.872912
90.0	3.872912
91.0	3.872912
92.0	3.872912
93.0	3.872912
94.0	3.872912
95.0	3.872912
96.0	3.872912
97.0	3.872912
98.0	3.872912
99.0	3.872912
100.0	3.872912