## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LB115_Br3-CRR995037.2x36mers.noMT.bwa.unique.bam] OUTPUT=LB115_Br3-CRR995037.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=LB115_Br3-CRR995037.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:18:08 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	21336765	0	0	5879200	4038216	0.275543	75396987

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.202222
2.0	2.108127
3.0	2.79075
4.0	3.305124
5.0	3.692717
6.0	3.984779
7.0	4.204855
8.0	4.370688
9.0	4.495648
10.0	4.589808
11.0	4.66076
12.0	4.714224
13.0	4.754511
14.0	4.784868
15.0	4.807742
16.0	4.824979
17.0	4.837967
18.0	4.847754
19.0	4.855129
20.0	4.860686
21.0	4.864874
22.0	4.868029
23.0	4.870407
24.0	4.872198
25.0	4.873548
26.0	4.874566
27.0	4.875332
28.0	4.87591
29.0	4.876345
30.0	4.876673
31.0	4.87692
32.0	4.877106
33.0	4.877247
34.0	4.877352
35.0	4.877432
36.0	4.877492
37.0	4.877537
38.0	4.877571
39.0	4.877597
40.0	4.877616
41.0	4.877631
42.0	4.877642
43.0	4.87765
44.0	4.877656
45.0	4.877661
46.0	4.877665
47.0	4.877667
48.0	4.877669
49.0	4.877671
50.0	4.877672
51.0	4.877673
52.0	4.877674
53.0	4.877674
54.0	4.877674
55.0	4.877675
56.0	4.877675
57.0	4.877675
58.0	4.877675
59.0	4.877675
60.0	4.877675
61.0	4.877675
62.0	4.877675
63.0	4.877675
64.0	4.877675
65.0	4.877676
66.0	4.877676
67.0	4.877676
68.0	4.877676
69.0	4.877676
70.0	4.877676
71.0	4.877676
72.0	4.877676
73.0	4.877676
74.0	4.877676
75.0	4.877676
76.0	4.877676
77.0	4.877676
78.0	4.877676
79.0	4.877676
80.0	4.877676
81.0	4.877676
82.0	4.877676
83.0	4.877676
84.0	4.877676
85.0	4.877676
86.0	4.877676
87.0	4.877676
88.0	4.877676
89.0	4.877676
90.0	4.877676
91.0	4.877676
92.0	4.877676
93.0	4.877676
94.0	4.877676
95.0	4.877676
96.0	4.877676
97.0	4.877676
98.0	4.877676
99.0	4.877676
100.0	4.877676