## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS70_Pl1-CRR995033.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS70_Pl1-CRR995033.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS70_Pl1-CRR995033.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:12:21 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	18593218	0	0	5804752	3267190	0.312197	41018380

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.169007
2.0	1.911951
3.0	2.384117
4.0	2.684194
5.0	2.874904
6.0	2.996106
7.0	3.073134
8.0	3.122088
9.0	3.1532
10.0	3.172973
11.0	3.185539
12.0	3.193525
13.0	3.198601
14.0	3.201826
15.0	3.203876
16.0	3.205179
17.0	3.206007
18.0	3.206534
19.0	3.206868
20.0	3.207081
21.0	3.207216
22.0	3.207301
23.0	3.207356
24.0	3.207391
25.0	3.207413
26.0	3.207427
27.0	3.207436
28.0	3.207441
29.0	3.207445
30.0	3.207447
31.0	3.207449
32.0	3.20745
33.0	3.20745
34.0	3.207451
35.0	3.207451
36.0	3.207451
37.0	3.207451
38.0	3.207451
39.0	3.207451
40.0	3.207451
41.0	3.207451
42.0	3.207451
43.0	3.207451
44.0	3.207451
45.0	3.207451
46.0	3.207451
47.0	3.207451
48.0	3.207451
49.0	3.207451
50.0	3.207451
51.0	3.207451
52.0	3.207451
53.0	3.207451
54.0	3.207451
55.0	3.207451
56.0	3.207451
57.0	3.207451
58.0	3.207451
59.0	3.207451
60.0	3.207451
61.0	3.207451
62.0	3.207451
63.0	3.207451
64.0	3.207451
65.0	3.207451
66.0	3.207451
67.0	3.207451
68.0	3.207451
69.0	3.207451
70.0	3.207451
71.0	3.207451
72.0	3.207451
73.0	3.207451
74.0	3.207451
75.0	3.207451
76.0	3.207451
77.0	3.207451
78.0	3.207451
79.0	3.207451
80.0	3.207451
81.0	3.207451
82.0	3.207451
83.0	3.207451
84.0	3.207451
85.0	3.207451
86.0	3.207451
87.0	3.207451
88.0	3.207451
89.0	3.207451
90.0	3.207451
91.0	3.207451
92.0	3.207451
93.0	3.207451
94.0	3.207451
95.0	3.207451
96.0	3.207451
97.0	3.207451
98.0	3.207451
99.0	3.207451
100.0	3.207451