## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS70_Mu2-CRR995031.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS70_Mu2-CRR995031.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS70_Mu2-CRR995031.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:12:21 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17678500	0	0	5222377	2950491	0.295408	42691663

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.162093
2.0	1.930163
3.0	2.437809
4.0	2.773331
5.0	2.995089
6.0	3.141658
7.0	3.23853
8.0	3.302557
9.0	3.344874
10.0	3.372843
11.0	3.391329
12.0	3.403547
13.0	3.411622
14.0	3.41696
15.0	3.420487
16.0	3.422819
17.0	3.42436
18.0	3.425378
19.0	3.426051
20.0	3.426496
21.0	3.42679
22.0	3.426985
23.0	3.427113
24.0	3.427198
25.0	3.427254
26.0	3.427291
27.0	3.427316
28.0	3.427332
29.0	3.427343
30.0	3.42735
31.0	3.427355
32.0	3.427358
33.0	3.42736
34.0	3.427361
35.0	3.427362
36.0	3.427362
37.0	3.427363
38.0	3.427363
39.0	3.427363
40.0	3.427363
41.0	3.427363
42.0	3.427364
43.0	3.427364
44.0	3.427364
45.0	3.427364
46.0	3.427364
47.0	3.427364
48.0	3.427364
49.0	3.427364
50.0	3.427364
51.0	3.427364
52.0	3.427364
53.0	3.427364
54.0	3.427364
55.0	3.427364
56.0	3.427364
57.0	3.427364
58.0	3.427364
59.0	3.427364
60.0	3.427364
61.0	3.427364
62.0	3.427364
63.0	3.427364
64.0	3.427364
65.0	3.427364
66.0	3.427364
67.0	3.427364
68.0	3.427364
69.0	3.427364
70.0	3.427364
71.0	3.427364
72.0	3.427364
73.0	3.427364
74.0	3.427364
75.0	3.427364
76.0	3.427364
77.0	3.427364
78.0	3.427364
79.0	3.427364
80.0	3.427364
81.0	3.427364
82.0	3.427364
83.0	3.427364
84.0	3.427364
85.0	3.427364
86.0	3.427364
87.0	3.427364
88.0	3.427364
89.0	3.427364
90.0	3.427364
91.0	3.427364
92.0	3.427364
93.0	3.427364
94.0	3.427364
95.0	3.427364
96.0	3.427364
97.0	3.427364
98.0	3.427364
99.0	3.427364
100.0	3.427364