## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS70_Mu1-CRR995030.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS70_Mu1-CRR995030.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS70_Mu1-CRR995030.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:12:20 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	22342769	0	0	5235796	2968392	0.23434	76181877

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.131967
2.0	1.976202
3.0	2.605842
4.0	3.075435
5.0	3.425663
6.0	3.686867
7.0	3.881676
8.0	4.026967
9.0	4.135327
10.0	4.216143
11.0	4.276416
12.0	4.321369
13.0	4.354895
14.0	4.3799
15.0	4.398548
16.0	4.412456
17.0	4.422829
18.0	4.430566
19.0	4.436335
20.0	4.440639
21.0	4.443848
22.0	4.446242
23.0	4.448027
24.0	4.449358
25.0	4.450351
26.0	4.451092
27.0	4.451644
28.0	4.452056
29.0	4.452363
30.0	4.452592
31.0	4.452763
32.0	4.452891
33.0	4.452986
34.0	4.453057
35.0	4.453109
36.0	4.453149
37.0	4.453178
38.0	4.4532
39.0	4.453217
40.0	4.453229
41.0	4.453238
42.0	4.453245
43.0	4.45325
44.0	4.453254
45.0	4.453256
46.0	4.453258
47.0	4.45326
48.0	4.453261
49.0	4.453262
50.0	4.453263
51.0	4.453263
52.0	4.453264
53.0	4.453264
54.0	4.453264
55.0	4.453264
56.0	4.453264
57.0	4.453264
58.0	4.453264
59.0	4.453264
60.0	4.453264
61.0	4.453265
62.0	4.453265
63.0	4.453265
64.0	4.453265
65.0	4.453265
66.0	4.453265
67.0	4.453265
68.0	4.453265
69.0	4.453265
70.0	4.453265
71.0	4.453265
72.0	4.453265
73.0	4.453265
74.0	4.453265
75.0	4.453265
76.0	4.453265
77.0	4.453265
78.0	4.453265
79.0	4.453265
80.0	4.453265
81.0	4.453265
82.0	4.453265
83.0	4.453265
84.0	4.453265
85.0	4.453265
86.0	4.453265
87.0	4.453265
88.0	4.453265
89.0	4.453265
90.0	4.453265
91.0	4.453265
92.0	4.453265
93.0	4.453265
94.0	4.453265
95.0	4.453265
96.0	4.453265
97.0	4.453265
98.0	4.453265
99.0	4.453265
100.0	4.453265