## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS70_Li3-CRR995029.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS70_Li3-CRR995029.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS70_Li3-CRR995029.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:12:21 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	24167805	0	0	4226507	2542086	0.174882	131516440

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.107111
2.0	2.028375
3.0	2.794989
4.0	3.432915
5.0	3.963753
6.0	4.405482
7.0	4.773059
8.0	5.078933
9.0	5.33346
10.0	5.545261
11.0	5.721507
12.0	5.868168
13.0	5.990209
14.0	6.091763
15.0	6.17627
16.0	6.246591
17.0	6.305107
18.0	6.353801
19.0	6.39432
20.0	6.428038
21.0	6.456095
22.0	6.479443
23.0	6.498871
24.0	6.515038
25.0	6.528491
26.0	6.539686
27.0	6.549002
28.0	6.556753
29.0	6.563204
30.0	6.568571
31.0	6.573038
32.0	6.576755
33.0	6.579848
34.0	6.582421
35.0	6.584563
36.0	6.586345
37.0	6.587828
38.0	6.589062
39.0	6.590089
40.0	6.590944
41.0	6.591655
42.0	6.592246
43.0	6.592739
44.0	6.593148
45.0	6.593489
46.0	6.593773
47.0	6.594009
48.0	6.594206
49.0	6.594369
50.0	6.594505
51.0	6.594618
52.0	6.594713
53.0	6.594791
54.0	6.594856
55.0	6.59491
56.0	6.594956
57.0	6.594993
58.0	6.595024
59.0	6.595051
60.0	6.595072
61.0	6.59509
62.0	6.595105
63.0	6.595118
64.0	6.595128
65.0	6.595137
66.0	6.595144
67.0	6.59515
68.0	6.595155
69.0	6.595159
70.0	6.595162
71.0	6.595165
72.0	6.595168
73.0	6.59517
74.0	6.595171
75.0	6.595173
76.0	6.595174
77.0	6.595175
78.0	6.595176
79.0	6.595176
80.0	6.595177
81.0	6.595177
82.0	6.595178
83.0	6.595178
84.0	6.595178
85.0	6.595178
86.0	6.595179
87.0	6.595179
88.0	6.595179
89.0	6.595179
90.0	6.595179
91.0	6.595179
92.0	6.595179
93.0	6.595179
94.0	6.595179
95.0	6.595179
96.0	6.595179
97.0	6.595179
98.0	6.595179
99.0	6.595179
100.0	6.595179