## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS168_O_Br3-CRR995010.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS168_O_Br3-CRR995010.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS168_O_Br3-CRR995010.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:36 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14136543	0	0	1913451	1172182	0.135355	109005602

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.084689
2.0	2.037449
3.0	2.874325
4.0	3.609413
5.0	4.255092
6.0	4.822239
7.0	5.320403
8.0	5.757977
9.0	6.142328
10.0	6.479931
11.0	6.776472
12.0	7.036945
13.0	7.265737
14.0	7.466701
15.0	7.643222
16.0	7.798273
17.0	7.934465
18.0	8.054092
19.0	8.159169
20.0	8.251466
21.0	8.332536
22.0	8.403747
23.0	8.466295
24.0	8.521237
25.0	8.569495
26.0	8.611884
27.0	8.649117
28.0	8.681822
29.0	8.710549
30.0	8.735782
31.0	8.757945
32.0	8.777413
33.0	8.794513
34.0	8.809534
35.0	8.822727
36.0	8.834316
37.0	8.844495
38.0	8.853436
39.0	8.861289
40.0	8.868188
41.0	8.874247
42.0	8.879569
43.0	8.884244
44.0	8.888351
45.0	8.891958
46.0	8.895126
47.0	8.897909
48.0	8.900353
49.0	8.9025
50.0	8.904386
51.0	8.906042
52.0	8.907498
53.0	8.908776
54.0	8.909898
55.0	8.910884
56.0	8.91175
57.0	8.912511
58.0	8.91318
59.0	8.913767
60.0	8.914282
61.0	8.914735
62.0	8.915133
63.0	8.915482
64.0	8.915789
65.0	8.916059
66.0	8.916295
67.0	8.916503
68.0	8.916686
69.0	8.916847
70.0	8.916988
71.0	8.917111
72.0	8.91722
73.0	8.917316
74.0	8.9174
75.0	8.917473
76.0	8.917538
77.0	8.917595
78.0	8.917645
79.0	8.917689
80.0	8.917727
81.0	8.917761
82.0	8.917791
83.0	8.917817
84.0	8.91784
85.0	8.91786
86.0	8.917878
87.0	8.917893
88.0	8.917907
89.0	8.917919
90.0	8.917929
91.0	8.917939
92.0	8.917947
93.0	8.917954
94.0	8.91796
95.0	8.917966
96.0	8.917971
97.0	8.917975
98.0	8.917979
99.0	8.917982
100.0	8.917985