## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS168_N_Li2-CRR995008.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS168_N_Li2-CRR995008.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS168_N_Li2-CRR995008.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:36 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	19654921	0	0	3878648	2012511	0.197337	77404665

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.100257
2.0	1.953782
3.0	2.615904
4.0	3.129546
5.0	3.528004
6.0	3.837108
7.0	4.076895
8.0	4.262911
9.0	4.407212
10.0	4.519154
11.0	4.605993
12.0	4.673359
13.0	4.725618
14.0	4.766157
15.0	4.797606
16.0	4.822002
17.0	4.840928
18.0	4.855609
19.0	4.866999
20.0	4.875834
21.0	4.882688
22.0	4.888005
23.0	4.892129
24.0	4.895329
25.0	4.897811
26.0	4.899736
27.0	4.90123
28.0	4.902389
29.0	4.903288
30.0	4.903985
31.0	4.904526
32.0	4.904946
33.0	4.905271
34.0	4.905524
35.0	4.90572
36.0	4.905872
37.0	4.90599
38.0	4.906081
39.0	4.906152
40.0	4.906207
41.0	4.90625
42.0	4.906283
43.0	4.906309
44.0	4.906328
45.0	4.906344
46.0	4.906356
47.0	4.906365
48.0	4.906372
49.0	4.906378
50.0	4.906382
51.0	4.906386
52.0	4.906388
53.0	4.90639
54.0	4.906392
55.0	4.906393
56.0	4.906394
57.0	4.906395
58.0	4.906395
59.0	4.906396
60.0	4.906396
61.0	4.906396
62.0	4.906397
63.0	4.906397
64.0	4.906397
65.0	4.906397
66.0	4.906397
67.0	4.906397
68.0	4.906397
69.0	4.906397
70.0	4.906397
71.0	4.906397
72.0	4.906397
73.0	4.906397
74.0	4.906397
75.0	4.906397
76.0	4.906397
77.0	4.906397
78.0	4.906397
79.0	4.906397
80.0	4.906397
81.0	4.906397
82.0	4.906397
83.0	4.906397
84.0	4.906397
85.0	4.906397
86.0	4.906397
87.0	4.906397
88.0	4.906397
89.0	4.906397
90.0	4.906397
91.0	4.906397
92.0	4.906397
93.0	4.906397
94.0	4.906397
95.0	4.906397
96.0	4.906397
97.0	4.906397
98.0	4.906397
99.0	4.906397
100.0	4.906397