## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS168_N_Br2-CRR995007.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS168_N_Br2-CRR995007.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS168_N_Br2-CRR995007.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:36 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	28407088	0	0	6165231	3275180	0.217031	100725108

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.112892
2.0	1.952295
3.0	2.585418
4.0	3.062954
5.0	3.423137
6.0	3.694807
7.0	3.899715
8.0	4.054268
9.0	4.17084
10.0	4.258765
11.0	4.325083
12.0	4.375103
13.0	4.412832
14.0	4.441288
15.0	4.462752
16.0	4.478941
17.0	4.491151
18.0	4.500361
19.0	4.507308
20.0	4.512547
21.0	4.516499
22.0	4.51948
23.0	4.521728
24.0	4.523424
25.0	4.524703
26.0	4.525668
27.0	4.526395
28.0	4.526944
29.0	4.527358
30.0	4.52767
31.0	4.527906
32.0	4.528083
33.0	4.528217
34.0	4.528318
35.0	4.528395
36.0	4.528452
37.0	4.528495
38.0	4.528528
39.0	4.528553
40.0	4.528571
41.0	4.528585
42.0	4.528596
43.0	4.528604
44.0	4.52861
45.0	4.528615
46.0	4.528618
47.0	4.528621
48.0	4.528623
49.0	4.528624
50.0	4.528625
51.0	4.528626
52.0	4.528627
53.0	4.528627
54.0	4.528627
55.0	4.528628
56.0	4.528628
57.0	4.528628
58.0	4.528628
59.0	4.528628
60.0	4.528628
61.0	4.528628
62.0	4.528628
63.0	4.528628
64.0	4.528628
65.0	4.528628
66.0	4.528628
67.0	4.528628
68.0	4.528629
69.0	4.528629
70.0	4.528629
71.0	4.528629
72.0	4.528629
73.0	4.528629
74.0	4.528629
75.0	4.528629
76.0	4.528629
77.0	4.528629
78.0	4.528629
79.0	4.528629
80.0	4.528629
81.0	4.528629
82.0	4.528629
83.0	4.528629
84.0	4.528629
85.0	4.528629
86.0	4.528629
87.0	4.528629
88.0	4.528629
89.0	4.528629
90.0	4.528629
91.0	4.528629
92.0	4.528629
93.0	4.528629
94.0	4.528629
95.0	4.528629
96.0	4.528629
97.0	4.528629
98.0	4.528629
99.0	4.528629
100.0	4.528629