## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS168_M_Li1-CRR995005.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS168_M_Li1-CRR995005.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS168_M_Li1-CRR995005.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:36 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	23478594	0	0	5623250	2668493	0.239505	66167281

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.10695
2.0	1.883241
3.0	2.427644
4.0	2.809427
5.0	3.077167
6.0	3.26493
7.0	3.396605
8.0	3.488948
9.0	3.553707
10.0	3.599121
11.0	3.63097
12.0	3.653305
13.0	3.668968
14.0	3.679953
15.0	3.687656
16.0	3.693058
17.0	3.696847
18.0	3.699504
19.0	3.701367
20.0	3.702673
21.0	3.70359
22.0	3.704232
23.0	3.704683
24.0	3.704999
25.0	3.705221
26.0	3.705376
27.0	3.705485
28.0	3.705562
29.0	3.705615
30.0	3.705653
31.0	3.705679
32.0	3.705698
33.0	3.705711
34.0	3.70572
35.0	3.705726
36.0	3.705731
37.0	3.705734
38.0	3.705736
39.0	3.705737
40.0	3.705738
41.0	3.705739
42.0	3.70574
43.0	3.70574
44.0	3.70574
45.0	3.705741
46.0	3.705741
47.0	3.705741
48.0	3.705741
49.0	3.705741
50.0	3.705741
51.0	3.705741
52.0	3.705741
53.0	3.705741
54.0	3.705741
55.0	3.705741
56.0	3.705741
57.0	3.705741
58.0	3.705741
59.0	3.705741
60.0	3.705741
61.0	3.705741
62.0	3.705741
63.0	3.705741
64.0	3.705741
65.0	3.705741
66.0	3.705741
67.0	3.705741
68.0	3.705741
69.0	3.705741
70.0	3.705741
71.0	3.705741
72.0	3.705741
73.0	3.705741
74.0	3.705741
75.0	3.705741
76.0	3.705741
77.0	3.705741
78.0	3.705741
79.0	3.705741
80.0	3.705741
81.0	3.705741
82.0	3.705741
83.0	3.705741
84.0	3.705741
85.0	3.705741
86.0	3.705741
87.0	3.705741
88.0	3.705741
89.0	3.705741
90.0	3.705741
91.0	3.705741
92.0	3.705741
93.0	3.705741
94.0	3.705741
95.0	3.705741
96.0	3.705741
97.0	3.705741
98.0	3.705741
99.0	3.705741
100.0	3.705741