## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS168_M_Br1-CRR995004.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS168_M_Br1-CRR995004.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS168_M_Br1-CRR995004.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:36 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	22452448	0	0	4303185	2138842	0.191658	88428644

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.092536
2.0	1.940089
3.0	2.597591
4.0	3.107659
5.0	3.503352
6.0	3.810317
7.0	4.04845
8.0	4.233185
9.0	4.376496
10.0	4.487672
11.0	4.573919
12.0	4.640826
13.0	4.69273
14.0	4.732996
15.0	4.764233
16.0	4.788465
17.0	4.807263
18.0	4.821847
19.0	4.83316
20.0	4.841936
21.0	4.848745
22.0	4.854027
23.0	4.858124
24.0	4.861303
25.0	4.863768
26.0	4.865681
27.0	4.867165
28.0	4.868317
29.0	4.86921
30.0	4.869903
31.0	4.87044
32.0	4.870857
33.0	4.87118
34.0	4.871431
35.0	4.871626
36.0	4.871777
37.0	4.871894
38.0	4.871985
39.0	4.872056
40.0	4.87211
41.0	4.872153
42.0	4.872186
43.0	4.872211
44.0	4.872231
45.0	4.872246
46.0	4.872258
47.0	4.872267
48.0	4.872275
49.0	4.87228
50.0	4.872285
51.0	4.872288
52.0	4.87229
53.0	4.872292
54.0	4.872294
55.0	4.872295
56.0	4.872296
57.0	4.872297
58.0	4.872297
59.0	4.872298
60.0	4.872298
61.0	4.872299
62.0	4.872299
63.0	4.872299
64.0	4.872299
65.0	4.872299
66.0	4.872299
67.0	4.872299
68.0	4.872299
69.0	4.872299
70.0	4.872299
71.0	4.872299
72.0	4.872299
73.0	4.872299
74.0	4.872299
75.0	4.872299
76.0	4.872299
77.0	4.872299
78.0	4.872299
79.0	4.872299
80.0	4.872299
81.0	4.872299
82.0	4.872299
83.0	4.872299
84.0	4.872299
85.0	4.872299
86.0	4.872299
87.0	4.872299
88.0	4.872299
89.0	4.872299
90.0	4.872299
91.0	4.872299
92.0	4.872299
93.0	4.872299
94.0	4.872299
95.0	4.872299
96.0	4.872299
97.0	4.872299
98.0	4.872299
99.0	4.872299
100.0	4.872299