## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DS115_Li1-CRR994998.2x36mers.noMT.bwa.unique.bam] OUTPUT=DS115_Li1-CRR994998.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DS115_Li1-CRR994998.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:35 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	29633151	0	0	8189440	4439888	0.276361	76012402

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.144381
2.0	1.919311
3.0	2.444063
4.0	2.799405
5.0	3.040028
6.0	3.202969
7.0	3.313307
8.0	3.388023
9.0	3.438617
10.0	3.472878
11.0	3.496078
12.0	3.511789
13.0	3.522427
14.0	3.529631
15.0	3.534509
16.0	3.537812
17.0	3.540049
18.0	3.541564
19.0	3.54259
20.0	3.543284
21.0	3.543754
22.0	3.544073
23.0	3.544289
24.0	3.544435
25.0	3.544534
26.0	3.544601
27.0	3.544646
28.0	3.544677
29.0	3.544697
30.0	3.544711
31.0	3.544721
32.0	3.544727
33.0	3.544732
34.0	3.544735
35.0	3.544737
36.0	3.544738
37.0	3.544739
38.0	3.54474
39.0	3.54474
40.0	3.54474
41.0	3.544741
42.0	3.544741
43.0	3.544741
44.0	3.544741
45.0	3.544741
46.0	3.544741
47.0	3.544741
48.0	3.544741
49.0	3.544741
50.0	3.544741
51.0	3.544741
52.0	3.544741
53.0	3.544741
54.0	3.544741
55.0	3.544741
56.0	3.544741
57.0	3.544741
58.0	3.544741
59.0	3.544741
60.0	3.544741
61.0	3.544741
62.0	3.544741
63.0	3.544741
64.0	3.544741
65.0	3.544741
66.0	3.544741
67.0	3.544741
68.0	3.544741
69.0	3.544741
70.0	3.544741
71.0	3.544741
72.0	3.544741
73.0	3.544741
74.0	3.544741
75.0	3.544741
76.0	3.544741
77.0	3.544741
78.0	3.544741
79.0	3.544741
80.0	3.544741
81.0	3.544741
82.0	3.544741
83.0	3.544741
84.0	3.544741
85.0	3.544741
86.0	3.544741
87.0	3.544741
88.0	3.544741
89.0	3.544741
90.0	3.544741
91.0	3.544741
92.0	3.544741
93.0	3.544741
94.0	3.544741
95.0	3.544741
96.0	3.544741
97.0	3.544741
98.0	3.544741
99.0	3.544741
100.0	3.544741