## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB70_Mu3-CRR994993.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB70_Mu3-CRR994993.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB70_Mu3-CRR994993.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:34 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	16746838	0	0	3370642	1994966	0.20127	74097061

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.120589
2.0	2.014492
3.0	2.727566
4.0	3.296391
5.0	3.750147
6.0	4.112113
7.0	4.400855
8.0	4.631188
9.0	4.814926
10.0	4.961496
11.0	5.078415
12.0	5.171683
13.0	5.246084
14.0	5.305434
15.0	5.352778
16.0	5.390544
17.0	5.420671
18.0	5.444704
19.0	5.463874
20.0	5.479167
21.0	5.491366
22.0	5.501098
23.0	5.50886
24.0	5.515053
25.0	5.519993
26.0	5.523933
27.0	5.527076
28.0	5.529584
29.0	5.531584
30.0	5.53318
31.0	5.534453
32.0	5.535468
33.0	5.536278
34.0	5.536924
35.0	5.537439
36.0	5.537851
37.0	5.538179
38.0	5.53844
39.0	5.538649
40.0	5.538815
41.0	5.538948
42.0	5.539054
43.0	5.539139
44.0	5.539206
45.0	5.53926
46.0	5.539303
47.0	5.539337
48.0	5.539364
49.0	5.539386
50.0	5.539403
51.0	5.539417
52.0	5.539428
53.0	5.539437
54.0	5.539444
55.0	5.53945
56.0	5.539454
57.0	5.539458
58.0	5.539461
59.0	5.539463
60.0	5.539465
61.0	5.539466
62.0	5.539467
63.0	5.539468
64.0	5.539469
65.0	5.53947
66.0	5.53947
67.0	5.53947
68.0	5.539471
69.0	5.539471
70.0	5.539471
71.0	5.539471
72.0	5.539471
73.0	5.539471
74.0	5.539472
75.0	5.539472
76.0	5.539472
77.0	5.539472
78.0	5.539472
79.0	5.539472
80.0	5.539472
81.0	5.539472
82.0	5.539472
83.0	5.539472
84.0	5.539472
85.0	5.539472
86.0	5.539472
87.0	5.539472
88.0	5.539472
89.0	5.539472
90.0	5.539472
91.0	5.539472
92.0	5.539472
93.0	5.539472
94.0	5.539472
95.0	5.539472
96.0	5.539472
97.0	5.539472
98.0	5.539472
99.0	5.539472
100.0	5.539472