## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB70_Mu2-CRR994992.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB70_Mu2-CRR994992.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB70_Mu2-CRR994992.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:33 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17479904	0	0	3867584	2254527	0.221259	66684710

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.129612
2.0	1.99875
3.0	2.667476
4.0	3.182002
5.0	3.577885
6.0	3.882482
7.0	4.116844
8.0	4.297164
9.0	4.435905
10.0	4.542654
11.0	4.624788
12.0	4.687983
13.0	4.736606
14.0	4.774018
15.0	4.802802
16.0	4.82495
17.0	4.84199
18.0	4.855101
19.0	4.865189
20.0	4.872951
21.0	4.878923
22.0	4.883518
23.0	4.887053
24.0	4.889773
25.0	4.891866
26.0	4.893476
27.0	4.894715
28.0	4.895669
29.0	4.896402
30.0	4.896967
31.0	4.897401
32.0	4.897735
33.0	4.897992
34.0	4.89819
35.0	4.898342
36.0	4.898459
37.0	4.898549
38.0	4.898618
39.0	4.898672
40.0	4.898713
41.0	4.898744
42.0	4.898769
43.0	4.898787
44.0	4.898802
45.0	4.898813
46.0	4.898821
47.0	4.898828
48.0	4.898833
49.0	4.898837
50.0	4.89884
51.0	4.898842
52.0	4.898844
53.0	4.898845
54.0	4.898846
55.0	4.898847
56.0	4.898848
57.0	4.898848
58.0	4.898848
59.0	4.898849
60.0	4.898849
61.0	4.898849
62.0	4.898849
63.0	4.898849
64.0	4.898849
65.0	4.89885
66.0	4.89885
67.0	4.89885
68.0	4.89885
69.0	4.89885
70.0	4.89885
71.0	4.89885
72.0	4.89885
73.0	4.89885
74.0	4.89885
75.0	4.89885
76.0	4.89885
77.0	4.89885
78.0	4.89885
79.0	4.89885
80.0	4.89885
81.0	4.89885
82.0	4.89885
83.0	4.89885
84.0	4.89885
85.0	4.89885
86.0	4.89885
87.0	4.89885
88.0	4.89885
89.0	4.89885
90.0	4.89885
91.0	4.89885
92.0	4.89885
93.0	4.89885
94.0	4.89885
95.0	4.89885
96.0	4.89885
97.0	4.89885
98.0	4.89885
99.0	4.89885
100.0	4.89885