## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB70_Li3-CRR994990.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB70_Li3-CRR994990.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB70_Li3-CRR994990.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:33 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17857709	0	0	5183988	2947705	0.290294	44599553

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.161109
2.0	1.939111
3.0	2.460412
4.0	2.809711
5.0	3.043759
6.0	3.200583
7.0	3.305663
8.0	3.376072
9.0	3.42325
10.0	3.454862
11.0	3.476043
12.0	3.490236
13.0	3.499745
14.0	3.506117
15.0	3.510387
16.0	3.513248
17.0	3.515165
18.0	3.516449
19.0	3.51731
20.0	3.517886
21.0	3.518273
22.0	3.518532
23.0	3.518705
24.0	3.518821
25.0	3.518899
26.0	3.518952
27.0	3.518986
28.0	3.51901
29.0	3.519026
30.0	3.519036
31.0	3.519043
32.0	3.519048
33.0	3.519051
34.0	3.519053
35.0	3.519055
36.0	3.519056
37.0	3.519056
38.0	3.519057
39.0	3.519057
40.0	3.519057
41.0	3.519057
42.0	3.519057
43.0	3.519057
44.0	3.519057
45.0	3.519057
46.0	3.519057
47.0	3.519057
48.0	3.519057
49.0	3.519057
50.0	3.519057
51.0	3.519058
52.0	3.519058
53.0	3.519058
54.0	3.519058
55.0	3.519058
56.0	3.519058
57.0	3.519058
58.0	3.519058
59.0	3.519058
60.0	3.519058
61.0	3.519058
62.0	3.519058
63.0	3.519058
64.0	3.519058
65.0	3.519058
66.0	3.519058
67.0	3.519058
68.0	3.519058
69.0	3.519058
70.0	3.519058
71.0	3.519058
72.0	3.519058
73.0	3.519058
74.0	3.519058
75.0	3.519058
76.0	3.519058
77.0	3.519058
78.0	3.519058
79.0	3.519058
80.0	3.519058
81.0	3.519058
82.0	3.519058
83.0	3.519058
84.0	3.519058
85.0	3.519058
86.0	3.519058
87.0	3.519058
88.0	3.519058
89.0	3.519058
90.0	3.519058
91.0	3.519058
92.0	3.519058
93.0	3.519058
94.0	3.519058
95.0	3.519058
96.0	3.519058
97.0	3.519058
98.0	3.519058
99.0	3.519058
100.0	3.519058