## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB40_Pl3-CRR994984.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB40_Pl3-CRR994984.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB40_Pl3-CRR994984.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:33 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	19850937	0	0	3838367	2638563	0.193359	117657543

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.140771
2.0	2.104433
3.0	2.918485
4.0	3.606152
5.0	4.187057
6.0	4.677775
7.0	5.092308
8.0	5.442483
9.0	5.738293
10.0	5.988177
11.0	6.199266
12.0	6.377583
13.0	6.528216
14.0	6.655462
15.0	6.762953
16.0	6.853756
17.0	6.930462
18.0	6.995258
19.0	7.049995
20.0	7.096234
21.0	7.135294
22.0	7.16829
23.0	7.196163
24.0	7.219709
25.0	7.239599
26.0	7.256401
27.0	7.270595
28.0	7.282585
29.0	7.292713
30.0	7.301269
31.0	7.308497
32.0	7.314603
33.0	7.31976
34.0	7.324117
35.0	7.327798
36.0	7.330907
37.0	7.333533
38.0	7.335752
39.0	7.337626
40.0	7.339209
41.0	7.340547
42.0	7.341677
43.0	7.342631
44.0	7.343437
45.0	7.344118
46.0	7.344693
47.0	7.345179
48.0	7.34559
49.0	7.345937
50.0	7.34623
51.0	7.346477
52.0	7.346686
53.0	7.346863
54.0	7.347012
55.0	7.347138
56.0	7.347245
57.0	7.347334
58.0	7.34741
59.0	7.347475
60.0	7.347529
61.0	7.347575
62.0	7.347613
63.0	7.347646
64.0	7.347674
65.0	7.347697
66.0	7.347717
67.0	7.347733
68.0	7.347747
69.0	7.347759
70.0	7.347769
71.0	7.347778
72.0	7.347785
73.0	7.347791
74.0	7.347796
75.0	7.3478
76.0	7.347804
77.0	7.347807
78.0	7.34781
79.0	7.347812
80.0	7.347814
81.0	7.347815
82.0	7.347817
83.0	7.347818
84.0	7.347819
85.0	7.347819
86.0	7.34782
87.0	7.347821
88.0	7.347821
89.0	7.347822
90.0	7.347822
91.0	7.347822
92.0	7.347822
93.0	7.347823
94.0	7.347823
95.0	7.347823
96.0	7.347823
97.0	7.347823
98.0	7.347823
99.0	7.347823
100.0	7.347823