## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB40_Pl1-CRR994982.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB40_Pl1-CRR994982.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB40_Pl1-CRR994982.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:12:21 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17471291	0	0	2350720	1702758	0.134548	186575234

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.103015
2.0	2.10743
3.0	3.022059
4.0	3.854927
5.0	4.613345
6.0	5.303967
7.0	5.932853
8.0	6.505522
9.0	7.026999
10.0	7.501861
11.0	7.934274
12.0	8.328034
13.0	8.686594
14.0	9.013102
15.0	9.310424
16.0	9.581167
17.0	9.827708
18.0	10.052211
19.0	10.256645
20.0	10.442804
21.0	10.612323
22.0	10.766688
23.0	10.907254
24.0	11.035254
25.0	11.151813
26.0	11.257952
27.0	11.354603
28.0	11.442614
29.0	11.522758
30.0	11.595738
31.0	11.662194
32.0	11.72271
33.0	11.777815
34.0	11.827995
35.0	11.87369
36.0	11.915299
37.0	11.953189
38.0	11.987692
39.0	12.019111
40.0	12.047721
41.0	12.073774
42.0	12.097497
43.0	12.119101
44.0	12.138772
45.0	12.156686
46.0	12.172998
47.0	12.187852
48.0	12.201378
49.0	12.213695
50.0	12.224911
51.0	12.235125
52.0	12.244425
53.0	12.252894
54.0	12.260606
55.0	12.267629
56.0	12.274023
57.0	12.279847
58.0	12.285149
59.0	12.289978
60.0	12.294375
61.0	12.298379
62.0	12.302025
63.0	12.305345
64.0	12.308368
65.0	12.311121
66.0	12.313628
67.0	12.315911
68.0	12.31799
69.0	12.319883
70.0	12.321607
71.0	12.323176
72.0	12.324606
73.0	12.325907
74.0	12.327092
75.0	12.328172
76.0	12.329154
77.0	12.330049
78.0	12.330864
79.0	12.331606
80.0	12.332282
81.0	12.332897
82.0	12.333458
83.0	12.333968
84.0	12.334433
85.0	12.334856
86.0	12.335241
87.0	12.335592
88.0	12.335911
89.0	12.336202
90.0	12.336467
91.0	12.336708
92.0	12.336928
93.0	12.337128
94.0	12.33731
95.0	12.337476
96.0	12.337627
97.0	12.337765
98.0	12.33789
99.0	12.338004
100.0	12.338108