## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB40_Mu3-CRR994981.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB40_Mu3-CRR994981.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB40_Mu3-CRR994981.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:33 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	22982751	0	0	6264439	5325813	0.272571	160137184

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.280612
2.0	2.390011
3.0	3.351088
4.0	4.183674
5.0	4.904946
6.0	5.529787
7.0	6.071089
8.0	6.540022
9.0	6.94626
10.0	7.298186
11.0	7.603061
12.0	7.867176
13.0	8.095979
14.0	8.294193
15.0	8.465906
16.0	8.614662
17.0	8.743529
18.0	8.855168
19.0	8.951881
20.0	9.035664
21.0	9.108246
22.0	9.171123
23.0	9.225595
24.0	9.272783
25.0	9.313663
26.0	9.349077
27.0	9.379757
28.0	9.406334
29.0	9.429359
30.0	9.449305
31.0	9.466585
32.0	9.481554
33.0	9.494522
34.0	9.505756
35.0	9.515488
36.0	9.523919
37.0	9.531223
38.0	9.537551
39.0	9.543032
40.0	9.547781
41.0	9.551894
42.0	9.555458
43.0	9.558545
44.0	9.56122
45.0	9.563537
46.0	9.565544
47.0	9.567283
48.0	9.568789
49.0	9.570094
50.0	9.571225
51.0	9.572204
52.0	9.573052
53.0	9.573787
54.0	9.574424
55.0	9.574976
56.0	9.575453
57.0	9.575867
58.0	9.576226
59.0	9.576537
60.0	9.576806
61.0	9.577039
62.0	9.577241
63.0	9.577416
64.0	9.577568
65.0	9.577699
66.0	9.577813
67.0	9.577911
68.0	9.577997
69.0	9.578071
70.0	9.578135
71.0	9.57819
72.0	9.578238
73.0	9.57828
74.0	9.578316
75.0	9.578347
76.0	9.578374
77.0	9.578398
78.0	9.578418
79.0	9.578436
80.0	9.578451
81.0	9.578464
82.0	9.578476
83.0	9.578486
84.0	9.578494
85.0	9.578502
86.0	9.578508
87.0	9.578514
88.0	9.578518
89.0	9.578523
90.0	9.578526
91.0	9.578529
92.0	9.578532
93.0	9.578534
94.0	9.578537
95.0	9.578538
96.0	9.57854
97.0	9.578541
98.0	9.578542
99.0	9.578543
100.0	9.578544