## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB40_Mu1-CRR994979.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB40_Mu1-CRR994979.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB40_Mu1-CRR994979.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:31 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17258926	0	0	2668612	2126176	0.154622	206009947

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.134708
2.0	2.178227
3.0	3.137884
4.0	4.02042
5.0	4.832032
6.0	5.578419
7.0	6.264824
8.0	6.896067
9.0	7.476581
10.0	8.010442
11.0	8.501401
12.0	8.952904
13.0	9.368122
14.0	9.749972
15.0	10.101135
16.0	10.424077
17.0	10.721067
18.0	10.994189
19.0	11.245362
20.0	11.47635
21.0	11.688774
22.0	11.884128
23.0	12.063782
24.0	12.228998
25.0	12.380937
26.0	12.520666
27.0	12.649165
28.0	12.767338
29.0	12.876014
30.0	12.975957
31.0	13.067867
32.0	13.152391
33.0	13.230123
34.0	13.301608
35.0	13.367348
36.0	13.427805
37.0	13.483403
38.0	13.534533
39.0	13.581555
40.0	13.624797
41.0	13.664564
42.0	13.701136
43.0	13.734768
44.0	13.765698
45.0	13.794142
46.0	13.8203
47.0	13.844356
48.0	13.866478
49.0	13.886823
50.0	13.905533
51.0	13.922739
52.0	13.938563
53.0	13.953115
54.0	13.966497
55.0	13.978804
56.0	13.990122
57.0	14.00053
58.0	14.010102
59.0	14.018905
60.0	14.027
61.0	14.034445
62.0	14.041291
63.0	14.047588
64.0	14.053378
65.0	14.058703
66.0	14.0636
67.0	14.068103
68.0	14.072245
69.0	14.076053
70.0	14.079556
71.0	14.082777
72.0	14.085739
73.0	14.088463
74.0	14.090969
75.0	14.093273
76.0	14.095391
77.0	14.09734
78.0	14.099132
79.0	14.10078
80.0	14.102295
81.0	14.103689
82.0	14.104971
83.0	14.106149
84.0	14.107233
85.0	14.10823
86.0	14.109147
87.0	14.10999
88.0	14.110765
89.0	14.111478
90.0	14.112134
91.0	14.112737
92.0	14.113292
93.0	14.113802
94.0	14.114271
95.0	14.114702
96.0	14.115099
97.0	14.115463
98.0	14.115799
99.0	14.116107
100.0	14.116391