## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB40_Li3-CRR994978.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB40_Li3-CRR994978.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB40_Li3-CRR994978.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:31 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	26453941	0	0	14773001	10199870	0.558442	23166283

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.350186
2.0	1.781175
3.0	1.91875
4.0	1.962664
5.0	1.976682
6.0	1.981157
7.0	1.982585
8.0	1.983041
9.0	1.983187
10.0	1.983233
11.0	1.983248
12.0	1.983253
13.0	1.983254
14.0	1.983255
15.0	1.983255
16.0	1.983255
17.0	1.983255
18.0	1.983255
19.0	1.983255
20.0	1.983255
21.0	1.983255
22.0	1.983255
23.0	1.983255
24.0	1.983255
25.0	1.983255
26.0	1.983255
27.0	1.983255
28.0	1.983255
29.0	1.983255
30.0	1.983255
31.0	1.983255
32.0	1.983255
33.0	1.983255
34.0	1.983255
35.0	1.983255
36.0	1.983255
37.0	1.983255
38.0	1.983255
39.0	1.983255
40.0	1.983255
41.0	1.983255
42.0	1.983255
43.0	1.983255
44.0	1.983255
45.0	1.983255
46.0	1.983255
47.0	1.983255
48.0	1.983255
49.0	1.983255
50.0	1.983255
51.0	1.983255
52.0	1.983255
53.0	1.983255
54.0	1.983255
55.0	1.983255
56.0	1.983255
57.0	1.983255
58.0	1.983255
59.0	1.983255
60.0	1.983255
61.0	1.983255
62.0	1.983255
63.0	1.983255
64.0	1.983255
65.0	1.983255
66.0	1.983255
67.0	1.983255
68.0	1.983255
69.0	1.983255
70.0	1.983255
71.0	1.983255
72.0	1.983255
73.0	1.983255
74.0	1.983255
75.0	1.983255
76.0	1.983255
77.0	1.983255
78.0	1.983255
79.0	1.983255
80.0	1.983255
81.0	1.983255
82.0	1.983255
83.0	1.983255
84.0	1.983255
85.0	1.983255
86.0	1.983255
87.0	1.983255
88.0	1.983255
89.0	1.983255
90.0	1.983255
91.0	1.983255
92.0	1.983255
93.0	1.983255
94.0	1.983255
95.0	1.983255
96.0	1.983255
97.0	1.983255
98.0	1.983255
99.0	1.983255
100.0	1.983255