## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB168_J_Mu3-CRR994972.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB168_J_Mu3-CRR994972.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB168_J_Mu3-CRR994972.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:31 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14571780	0	0	3829392	2093003	0.262795	40576188

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.139622
2.0	1.935408
3.0	2.491097
4.0	2.879129
5.0	3.150087
6.0	3.339295
7.0	3.471417
8.0	3.563676
9.0	3.628099
10.0	3.673086
11.0	3.704499
12.0	3.726435
13.0	3.741752
14.0	3.752448
15.0	3.759917
16.0	3.765133
17.0	3.768775
18.0	3.771318
19.0	3.773094
20.0	3.774334
21.0	3.7752
22.0	3.775804
23.0	3.776227
24.0	3.776521
25.0	3.776727
26.0	3.776871
27.0	3.776971
28.0	3.777041
29.0	3.77709
30.0	3.777125
31.0	3.777148
32.0	3.777165
33.0	3.777177
34.0	3.777185
35.0	3.777191
36.0	3.777195
37.0	3.777197
38.0	3.777199
39.0	3.777201
40.0	3.777202
41.0	3.777202
42.0	3.777203
43.0	3.777203
44.0	3.777203
45.0	3.777203
46.0	3.777203
47.0	3.777204
48.0	3.777204
49.0	3.777204
50.0	3.777204
51.0	3.777204
52.0	3.777204
53.0	3.777204
54.0	3.777204
55.0	3.777204
56.0	3.777204
57.0	3.777204
58.0	3.777204
59.0	3.777204
60.0	3.777204
61.0	3.777204
62.0	3.777204
63.0	3.777204
64.0	3.777204
65.0	3.777204
66.0	3.777204
67.0	3.777204
68.0	3.777204
69.0	3.777204
70.0	3.777204
71.0	3.777204
72.0	3.777204
73.0	3.777204
74.0	3.777204
75.0	3.777204
76.0	3.777204
77.0	3.777204
78.0	3.777204
79.0	3.777204
80.0	3.777204
81.0	3.777204
82.0	3.777204
83.0	3.777204
84.0	3.777204
85.0	3.777204
86.0	3.777204
87.0	3.777204
88.0	3.777204
89.0	3.777204
90.0	3.777204
91.0	3.777204
92.0	3.777204
93.0	3.777204
94.0	3.777204
95.0	3.777204
96.0	3.777204
97.0	3.777204
98.0	3.777204
99.0	3.777204
100.0	3.777204