## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB168_J_Li3-CRR994971.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB168_J_Li3-CRR994971.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB168_J_Li3-CRR994971.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:31 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	18555025	0	0	3237299	1858727	0.17447	95461340

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.100888
2.0	2.007307
3.0	2.753607
4.0	3.368075
5.0	3.873998
6.0	4.29055
7.0	4.633519
8.0	4.915903
9.0	5.148404
10.0	5.339835
11.0	5.497449
12.0	5.627221
13.0	5.734069
14.0	5.822043
15.0	5.894476
16.0	5.954113
17.0	6.003216
18.0	6.043645
19.0	6.076933
20.0	6.10434
21.0	6.126905
22.0	6.145485
23.0	6.160782
24.0	6.173377
25.0	6.183748
26.0	6.192286
27.0	6.199316
28.0	6.205104
29.0	6.20987
30.0	6.213794
31.0	6.217025
32.0	6.219685
33.0	6.221875
34.0	6.223678
35.0	6.225163
36.0	6.226385
37.0	6.227392
38.0	6.22822
39.0	6.228903
40.0	6.229465
41.0	6.229927
42.0	6.230308
43.0	6.230622
44.0	6.23088
45.0	6.231092
46.0	6.231267
47.0	6.231411
48.0	6.23153
49.0	6.231628
50.0	6.231708
51.0	6.231774
52.0	6.231829
53.0	6.231874
54.0	6.231911
55.0	6.231941
56.0	6.231966
57.0	6.231987
58.0	6.232004
59.0	6.232018
60.0	6.232029
61.0	6.232039
62.0	6.232047
63.0	6.232053
64.0	6.232058
65.0	6.232063
66.0	6.232066
67.0	6.232069
68.0	6.232072
69.0	6.232074
70.0	6.232075
71.0	6.232077
72.0	6.232078
73.0	6.232079
74.0	6.232079
75.0	6.23208
76.0	6.232081
77.0	6.232081
78.0	6.232081
79.0	6.232082
80.0	6.232082
81.0	6.232082
82.0	6.232082
83.0	6.232082
84.0	6.232083
85.0	6.232083
86.0	6.232083
87.0	6.232083
88.0	6.232083
89.0	6.232083
90.0	6.232083
91.0	6.232083
92.0	6.232083
93.0	6.232083
94.0	6.232083
95.0	6.232083
96.0	6.232083
97.0	6.232083
98.0	6.232083
99.0	6.232083
100.0	6.232083