## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[DB115_Li2-CRR994959.2x36mers.noMT.bwa.unique.bam] OUTPUT=DB115_Li2-CRR994959.2x36mers.noMT.bwa.unique.dedup.bam METRICS_FILE=DB115_Li2-CRR994959.2x36mers.noMT.bwa.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 13 16:11:31 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	21790106	0	0	7852483	4610328	0.360369	39589263

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.20232
2.0	1.895718
3.0	2.295612
4.0	2.526237
5.0	2.659242
6.0	2.735949
7.0	2.780187
8.0	2.8057
9.0	2.820413
10.0	2.828899
11.0	2.833792
12.0	2.836615
13.0	2.838242
14.0	2.839181
15.0	2.839723
16.0	2.840035
17.0	2.840215
18.0	2.840319
19.0	2.840379
20.0	2.840413
21.0	2.840433
22.0	2.840445
23.0	2.840451
24.0	2.840455
25.0	2.840457
26.0	2.840458
27.0	2.840459
28.0	2.84046
29.0	2.84046
30.0	2.84046
31.0	2.84046
32.0	2.84046
33.0	2.84046
34.0	2.84046
35.0	2.84046
36.0	2.84046
37.0	2.84046
38.0	2.84046
39.0	2.84046
40.0	2.84046
41.0	2.84046
42.0	2.84046
43.0	2.84046
44.0	2.84046
45.0	2.84046
46.0	2.84046
47.0	2.84046
48.0	2.84046
49.0	2.84046
50.0	2.84046
51.0	2.84046
52.0	2.84046
53.0	2.84046
54.0	2.84046
55.0	2.84046
56.0	2.84046
57.0	2.84046
58.0	2.84046
59.0	2.84046
60.0	2.84046
61.0	2.84046
62.0	2.84046
63.0	2.84046
64.0	2.84046
65.0	2.84046
66.0	2.84046
67.0	2.84046
68.0	2.84046
69.0	2.84046
70.0	2.84046
71.0	2.84046
72.0	2.84046
73.0	2.84046
74.0	2.84046
75.0	2.84046
76.0	2.84046
77.0	2.84046
78.0	2.84046
79.0	2.84046
80.0	2.84046
81.0	2.84046
82.0	2.84046
83.0	2.84046
84.0	2.84046
85.0	2.84046
86.0	2.84046
87.0	2.84046
88.0	2.84046
89.0	2.84046
90.0	2.84046
91.0	2.84046
92.0	2.84046
93.0	2.84046
94.0	2.84046
95.0	2.84046
96.0	2.84046
97.0	2.84046
98.0	2.84046
99.0	2.84046
100.0	2.84046