Index of /kundaje/marinovg/oak/various/2024-04-02-Marta_Seczynska-RNA-seq

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2024-04-02-Marta_Seczynska-RNA-seq.pdf2024-04-03 23:11 804K 
[ ]2024-04-02-Marta_Seczynska-RNA-seq.pptx2024-04-03 23:09 685K 
[DIR]DESeq2-RSEM-refSeq-hg38/2024-04-03 18:08 -  
[DIR]DESeq2-RSEM-refSeq-hs1-T2T/2024-04-03 18:02 -  
[DIR]DESeq2-eXpress-refSeq-hg38/2024-04-03 18:12 -  
[DIR]DESeq2-eXpress-refSeq-hs1-T2T/2024-04-03 17:57 -  
[DIR]MS135_hiPSC_WTC-11_NTC_CRISPRi_1/2025-04-21 12:30 -  
[DIR]MS136_hiPSC_WTC-11_NTC_CRISPRi_2/2025-04-21 12:30 -  
[DIR]MS137_hiPSC_WTC-11_NTC_CRISPRi_3/2025-04-21 12:30 -  
[DIR]MS138_hiPSC_WTC-11_TASOR2_CRISPRi_1/2025-04-21 12:30 -  
[DIR]MS139_hiPSC_WTC-11_TASOR2_CRISPRi_2/2025-04-21 12:30 -  
[DIR]MS140_hiPSC_WTC-11_TASOR2_CRISPRi_3/2025-04-21 12:30 -  
[DIR]MS141_hiPSC_WTC-11_TASOR_CRISPRi_1/2025-04-21 12:30 -  
[DIR]MS142_hiPSC_WTC-11_TASOR_CRISPRi_2/2025-04-21 12:30 -  
[DIR]MS143_hiPSC_WTC-11_MPP8_CRISPRi_1/2025-04-21 12:30 -  
[DIR]MS144_hiPSC_WTC-11_MPP8_CRISPRi_2/2025-04-21 12:30 -  
[ ]RSEM-1.3.0-refSeq.RNA-seq.2x50mers.TPM.files2024-04-03 17:44 1.0K 
[ ]RSEM-1.3.0-refSeq.RNA-seq.2x50mers.TPM.table2024-04-03 17:44 1.5M 
[ ]RSEM-1.3.0-refSeq.RNA-seq.2x50mers.eff_counts.files2024-04-03 17:44 1.0K 
[ ]RSEM-1.3.0-refSeq.RNA-seq.2x50mers.eff_counts.int.table2024-04-03 17:44 1.0M 
[ ]RSEM-1.3.0-refSeq.RNA-seq.2x50mers.eff_counts.table2024-04-03 17:44 1.6M 
[ ]RSEM-1.3.0-refSeq.RNA-seq.2x50mers.log2.minMax10.table2024-04-03 17:44 1.1M 
[ ]RSEM-1.3.0.RNA-seq.2x50mers.TPM.files2024-04-03 17:36 1.0K 
[ ]RSEM-1.3.0.RNA-seq.2x50mers.TPM.table2024-04-03 17:36 3.0M 
[ ]RSEM-1.3.0.RNA-seq.2x50mers.eff_counts.files2024-04-03 17:36 1.0K 
[ ]RSEM-1.3.0.RNA-seq.2x50mers.eff_counts.int.table2024-04-03 17:37 1.9M 
[ ]RSEM-1.3.0.RNA-seq.2x50mers.eff_counts.table2024-04-03 17:36 3.1M 
[ ]RSEM-1.3.0.RNA-seq.2x50mers.log2.minMax10.table2024-04-03 17:37 1.2M 
[ ]RSEM-files.tar.gz2024-04-03 17:45 165M 
[ ]SAMstats.files2024-04-03 22:57 1.8K 
[ ]SAMstats.hg38.table2024-04-03 22:58 1.0K 
[ ]SAMstats.hs1.table2024-04-03 22:58 1.0K 
[ ]SAMstats.table2024-04-03 22:57 2.1K 
[ ]SAMstats_files.tar.gz2024-04-03 22:57 1.4K 
[DIR]clustering/2024-04-03 18:26 -  
[ ]coverage.files2024-04-03 23:02 1.0K 
[ ]coverage.table2024-04-03 23:02 20K 
[ ]coverage_files.tar.gz2024-04-03 23:02 11K 
[ ]express-1.5.1.RNA-seq.2x50mers.TPM.files2024-04-03 17:34 1.1K 
[ ]express-1.5.1.RNA-seq.2x50mers.TPM.table2024-04-03 17:35 5.1M 
[ ]express-1.5.1.RNA-seq.2x50mers.eff_counts.files2024-04-03 17:35 1.1K 
[ ]express-1.5.1.RNA-seq.2x50mers.eff_counts.int.table2024-04-03 17:35 1.9M 
[ ]express-1.5.1.RNA-seq.2x50mers.eff_counts.table2024-04-03 17:35 4.1M 
[ ]express-1.5.1.RNA-seq.2x50mers.log2.minMax10.table2024-04-03 17:35 1.4M 
[ ]express-1.5.1.hg38-refSeq.RNA-seq.2x50mers.TPM.files2024-04-03 17:40 1.2K 
[ ]express-1.5.1.hg38-refSeq.RNA-seq.2x50mers.TPM.table2024-04-03 17:42 2.4M 
[ ]express-1.5.1.hg38-refSeq.RNA-seq.2x50mers.eff_counts.files2024-04-03 17:41 1.2K 
[ ]express-1.5.1.hg38-refSeq.RNA-seq.2x50mers.eff_counts.int.table2024-04-03 17:51 1.0M 
[ ]express-1.5.1.hg38-refSeq.RNA-seq.2x50mers.eff_counts.table2024-04-03 17:42 2.4M 
[ ]express-1.5.1.hg38-refSeq.RNA-seq.2x50mers.log2.minMax10.table2024-04-03 17:44 1.3M 
[ ]express-individual-files-hg38.tar.gz2024-04-03 17:42 39M 
[ ]express-individual-files.tar.gz2024-04-03 17:43 127M 
[ ]hg38.repeatMasker.RNA-seq.2x50mers.a.RPKM.class.log2.table2024-04-04 13:33 0  
[TXT]hg38.repeatMasker.RNA-seq.2x50mers.a.RPKM.repeat.log2.table2024-04-04 13:33 0  
[ ]hg38.repeatMasker.RNA.2x50mers.a.RPKM.class.log2.table2024-04-04 13:33 0  
[ ]hg38.repeatMasker.RNA.2x50mers.a.RPKM.class.table2024-04-04 13:32 9.4K 
[TXT]hg38.repeatMasker.RNA.2x50mers.a.RPKM.files2024-04-03 17:21 1.4K 
[TXT]hg38.repeatMasker.RNA.2x50mers.a.RPKM.repeat.log2.table2024-04-04 13:33 0  
[TXT]hg38.repeatMasker.RNA.2x50mers.a.RPKM.repeat.table2024-04-04 13:32 1.4M 
[ ]hg38.repeatMasker.RNA.2x50mers.a.RPKM.table.gz2024-04-04 13:01 250M 
[ ]hg38.repeatMasker.RNA.2x50mers.a.counts.class.table2024-04-04 13:32 8.0K 
[TXT]hg38.repeatMasker.RNA.2x50mers.a.counts.files2024-04-03 17:21 1.4K 
[TXT]hg38.repeatMasker.RNA.2x50mers.a.counts.repeat.table2024-04-04 13:32 914K 
[ ]hg38.repeatMasker.RNA.2x50mers.a.counts.table.gz2024-04-04 13:01 190M 
[TXT]hs1.repeatMasker.MS135_hiPSC_WTC-11_NTC_CRISPRi_1.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:02 520M 
[TXT]hs1.repeatMasker.MS136_hiPSC_WTC-11_NTC_CRISPRi_2.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 08:57 520M 
[TXT]hs1.repeatMasker.MS137_hiPSC_WTC-11_NTC_CRISPRi_3.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:05 518M 
[TXT]hs1.repeatMasker.MS138_hiPSC_WTC-11_TASOR2_CRISPRi_1.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:02 520M 
[TXT]hs1.repeatMasker.MS139_hiPSC_WTC-11_TASOR2_CRISPRi_2.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:10 520M 
[TXT]hs1.repeatMasker.MS140_hiPSC_WTC-11_TASOR2_CRISPRi_3.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:09 519M 
[TXT]hs1.repeatMasker.MS141_hiPSC_WTC-11_TASOR_CRISPRi_1.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:23 520M 
[TXT]hs1.repeatMasker.MS142_hiPSC_WTC-11_TASOR_CRISPRi_2.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:12 520M 
[TXT]hs1.repeatMasker.MS143_hiPSC_WTC-11_MPP8_CRISPRi_1.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:16 521M 
[TXT]hs1.repeatMasker.MS144_hiPSC_WTC-11_MPP8_CRISPRi_2.2x50mers.hs1-T2T-CHM13v2.0.a.RPKM2024-04-04 09:20 520M 
[ ]hs1.repeatMasker.RNA.2x50mers.a.RPKM.class.table2024-04-04 13:32 11K 
[TXT]hs1.repeatMasker.RNA.2x50mers.a.RPKM.files2024-04-03 17:47 1.5K 
[TXT]hs1.repeatMasker.RNA.2x50mers.a.RPKM.repeat.table2024-04-04 13:32 1.4M 
[TXT]hs1.repeatMasker.RNA.2x50mers.a.RPKM.table2024-04-04 13:01 820M 
[ ]hs1.repeatMasker.RNA.2x50mers.a.counts.class.table2024-04-04 13:32 8.6K 
[TXT]hs1.repeatMasker.RNA.2x50mers.a.counts.files2024-04-03 17:21 1.6K 
[TXT]hs1.repeatMasker.RNA.2x50mers.a.counts.repeat.table2024-04-04 13:32 926K 
[ ]hs1.repeatMasker.RNA.2x50mers.a.counts.table.gz2024-04-04 13:01 192M 
[ ]sam_reads_genes.files2024-04-03 17:28 890  
[ ]sam_reads_genes.table2024-04-03 23:00 830  
[ ]sam_reads_genes_files.tar.gz2024-04-03 23:00 772  
[ ]stringtie-2.0-gencode_v26-hg38.RNA-seq.2x50mers.TPM.edited.log2.minMax10.table2024-04-03 17:38 0  
[ ]stringtie-2.0-gencode_v26-hg38.RNA-seq.2x50mers.TPM.files2024-04-03 17:18 1.2K 
[ ]stringtie-2.0-gencode_v26-hg38.RNA-seq.2x50mers.TPM.table2024-04-03 17:38 5.8M 
[ ]stringtie-2.0-refSeq-hg38.RNA-seq.2x50mers.TPM.edited.log2.minMax10.table2024-04-03 17:38 0  
[ ]stringtie-2.0-refSeq-hg38.RNA-seq.2x50mers.TPM.files2024-04-03 17:18 1.2K 
[ ]stringtie-2.0-refSeq-hg38.RNA-seq.2x50mers.TPM.table2024-04-03 17:38 2.7M 
[ ]stringtie-2.0-refSeq-hs1-T2T.RNA-seq.2x50mers.TPM.edited.log2.minMax10.table2024-04-03 17:38 0  
[ ]stringtie-2.0-refSeq-hs1-T2T.RNA-seq.2x50mers.TPM.files2024-04-03 17:18 1.2K 
[ ]stringtie-2.0-refSeq-hs1-T2T.RNA-seq.2x50mers.TPM.table2024-04-03 17:38 5.3M 
[ ]stringtie-files.tar.gz2024-04-03 17:38 35M 
[ ]z2024-04-03 23:15 6.3K 
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