python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CEBPB-ENCFF014TJO-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-CEBPB-ENCFF014TJO-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CEBPB-ENCFF014TJO-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-CEBPB-ENCFF014TJO-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CEBPB-ENCFF014TJO-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-CEBPB-ENCFF014TJO-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CTCF-ENCFF548ARU-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-CTCF-ENCFF548ARU-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CTCF-ENCFF548ARU-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-CTCF-ENCFF548ARU-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CTCF-ENCFF548ARU-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-CTCF-ENCFF548ARU-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F1-ENCFF872RSG-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F1-ENCFF872RSG-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F1-ENCFF872RSG-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F1-ENCFF872RSG-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F1-ENCFF872RSG-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F1-ENCFF872RSG-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F4-ENCFF718JTU-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F4-ENCFF718JTU-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F4-ENCFF718JTU-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F4-ENCFF718JTU-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F4-ENCFF718JTU-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F4-ENCFF718JTU-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F6-ENCFF160MCO-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F6-ENCFF160MCO-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F6-ENCFF160MCO-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F6-ENCFF160MCO-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F6-ENCFF160MCO-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-E2F6-ENCFF160MCO-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ELK4-ENCFF582BHA-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ELK4-ENCFF582BHA-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ELK4-ENCFF582BHA-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ELK4-ENCFF582BHA-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ELK4-ENCFF582BHA-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ELK4-ENCFF582BHA-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-FOS-ENCFF198MNT-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-FOS-ENCFF198MNT-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-FOS-ENCFF198MNT-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-FOS-ENCFF198MNT-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-FOS-ENCFF198MNT-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-FOS-ENCFF198MNT-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-GABPA-ENCFF168BDU-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-GABPA-ENCFF168BDU-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-GABPA-ENCFF168BDU-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-GABPA-ENCFF168BDU-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-GABPA-ENCFF168BDU-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-GABPA-ENCFF168BDU-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-IRF3-ENCFF291VFT-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-IRF3-ENCFF291VFT-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-IRF3-ENCFF291VFT-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-IRF3-ENCFF291VFT-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-IRF3-ENCFF291VFT-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-IRF3-ENCFF291VFT-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUND-ENCFF995QMN-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-JUND-ENCFF995QMN-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUND-ENCFF995QMN-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-JUND-ENCFF995QMN-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUND-ENCFF995QMN-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-JUND-ENCFF995QMN-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUN-ENCFF806AQE-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-JUN-ENCFF806AQE-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUN-ENCFF806AQE-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-JUN-ENCFF806AQE-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUN-ENCFF806AQE-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-JUN-ENCFF806AQE-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFF-ENCFF280WZN-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAFF-ENCFF280WZN-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFF-ENCFF280WZN-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAFF-ENCFF280WZN-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFF-ENCFF280WZN-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAFF-ENCFF280WZN-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFK-ENCFF425IRA-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAFK-ENCFF425IRA-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFK-ENCFF425IRA-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAFK-ENCFF425IRA-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFK-ENCFF425IRA-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAFK-ENCFF425IRA-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAX-ENCFF666XCS-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAX-ENCFF666XCS-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAX-ENCFF666XCS-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAX-ENCFF666XCS-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAX-ENCFF666XCS-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAX-ENCFF666XCS-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAZ-ENCFF424JHD-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAZ-ENCFF424JHD-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAZ-ENCFF424JHD-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAZ-ENCFF424JHD-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAZ-ENCFF424JHD-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MAZ-ENCFF424JHD-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MXI1-ENCFF420AQP-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MXI1-ENCFF420AQP-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MXI1-ENCFF420AQP-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MXI1-ENCFF420AQP-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MXI1-ENCFF420AQP-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MXI1-ENCFF420AQP-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MYC-ENCFF515BTV-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MYC-ENCFF515BTV-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MYC-ENCFF515BTV-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MYC-ENCFF515BTV-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MYC-ENCFF515BTV-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-MYC-ENCFF515BTV-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYA-ENCFF865QSV-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NFYA-ENCFF865QSV-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYA-ENCFF865QSV-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NFYA-ENCFF865QSV-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYA-ENCFF865QSV-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NFYA-ENCFF865QSV-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYB-ENCFF191KVV-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NFYB-ENCFF191KVV-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYB-ENCFF191KVV-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NFYB-ENCFF191KVV-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYB-ENCFF191KVV-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NFYB-ENCFF191KVV-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NRF1-ENCFF730BLH-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NRF1-ENCFF730BLH-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NRF1-ENCFF730BLH-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NRF1-ENCFF730BLH-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NRF1-ENCFF730BLH-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-NRF1-ENCFF730BLH-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-REST-ENCFF096JDA-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-REST-ENCFF096JDA-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-REST-ENCFF096JDA-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-REST-ENCFF096JDA-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-REST-ENCFF096JDA-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-REST-ENCFF096JDA-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-RFX5-ENCFF438ZEN-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-RFX5-ENCFF438ZEN-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-RFX5-ENCFF438ZEN-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-RFX5-ENCFF438ZEN-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-RFX5-ENCFF438ZEN-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-RFX5-ENCFF438ZEN-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT1-ENCFF186VMW-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-STAT1-ENCFF186VMW-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT1-ENCFF186VMW-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-STAT1-ENCFF186VMW-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT1-ENCFF186VMW-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-STAT1-ENCFF186VMW-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT3-ENCFF746VUX-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-STAT3-ENCFF746VUX-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT3-ENCFF746VUX-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-STAT3-ENCFF746VUX-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT3-ENCFF746VUX-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-STAT3-ENCFF746VUX-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TBP-ENCFF363NQY-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-TBP-ENCFF363NQY-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TBP-ENCFF363NQY-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-TBP-ENCFF363NQY-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TBP-ENCFF363NQY-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-TBP-ENCFF363NQY-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TCF7L2-ENCFF936XIP-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-TCF7L2-ENCFF936XIP-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TCF7L2-ENCFF936XIP-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-TCF7L2-ENCFF936XIP-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TCF7L2-ENCFF936XIP-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-TCF7L2-ENCFF936XIP-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-USF2-ENCFF405SDO-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-USF2-ENCFF405SDO-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-USF2-ENCFF405SDO-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-USF2-ENCFF405SDO-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-USF2-ENCFF405SDO-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-USF2-ENCFF405SDO-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZNF143-ENCFF236NLF-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ZNF143-ENCFF236NLF-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZNF143-ENCFF236NLF-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ZNF143-ENCFF236NLF-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZNF143-ENCFF236NLF-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ZNF143-ENCFF236NLF-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZHX1-ENCFF988ZWG-vs-FIMO-intersection2.gz 2 3 5 100 starved_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ZHX1-ENCFF988ZWG-ChIP-starved_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZHX1-ENCFF988ZWG-vs-FIMO-intersection2.gz 2 3 5 100 stimulated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ZHX1-ENCFF988ZWG-ChIP-stimulated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZHX1-ENCFF988ZWG-vs-FIMO-intersection2.gz 2 3 5 100 untreated_cellular_UV-vs-naked_UV.bigWig signal-around-HeLas3-ZHX1-ENCFF988ZWG-ChIP-untreated_cellular_UV-vs-naked_UV -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CEBPB-ENCFF014TJO-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-CEBPB-ENCFF014TJO-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-CTCF-ENCFF548ARU-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-CTCF-ENCFF548ARU-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F1-ENCFF872RSG-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-E2F1-ENCFF872RSG-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F4-ENCFF718JTU-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-E2F4-ENCFF718JTU-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-E2F6-ENCFF160MCO-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-E2F6-ENCFF160MCO-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ELK4-ENCFF582BHA-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-ELK4-ENCFF582BHA-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-FOS-ENCFF198MNT-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-FOS-ENCFF198MNT-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-GABPA-ENCFF168BDU-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-GABPA-ENCFF168BDU-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-IRF3-ENCFF291VFT-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-IRF3-ENCFF291VFT-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUND-ENCFF995QMN-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-JUND-ENCFF995QMN-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-JUN-ENCFF806AQE-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-JUN-ENCFF806AQE-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFF-ENCFF280WZN-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-MAFF-ENCFF280WZN-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAFK-ENCFF425IRA-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-MAFK-ENCFF425IRA-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAX-ENCFF666XCS-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-MAX-ENCFF666XCS-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MAZ-ENCFF424JHD-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-MAZ-ENCFF424JHD-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MXI1-ENCFF420AQP-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-MXI1-ENCFF420AQP-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-MYC-ENCFF515BTV-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-MYC-ENCFF515BTV-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYA-ENCFF865QSV-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-NFYA-ENCFF865QSV-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NFYB-ENCFF191KVV-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-NFYB-ENCFF191KVV-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-NRF1-ENCFF730BLH-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-NRF1-ENCFF730BLH-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-REST-ENCFF096JDA-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-REST-ENCFF096JDA-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-RFX5-ENCFF438ZEN-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-RFX5-ENCFF438ZEN-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT1-ENCFF186VMW-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-STAT1-ENCFF186VMW-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-STAT3-ENCFF746VUX-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-STAT3-ENCFF746VUX-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TBP-ENCFF363NQY-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-TBP-ENCFF363NQY-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-TCF7L2-ENCFF936XIP-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-TCF7L2-ENCFF936XIP-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-USF2-ENCFF405SDO-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-USF2-ENCFF405SDO-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZNF143-ENCFF236NLF-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-ZNF143-ENCFF236NLF-ChIP-UV+_cellular-vs-UV-_control -normalize -bed
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py HeLas3-ZHX1-ENCFF988ZWG-vs-FIMO-intersection2.gz 2 3 5 100 UV+_cellular-vs-UV-_control.bigWig signal-around-HeLas3-ZHX1-ENCFF988ZWG-ChIP-UV+_cellular-vs-UV-_control -normalize -bed