/oak/stanford/groups/akundaje/marinovg/programs/minimap2-2.17_x64-linux/minimap2  -ax map-ont /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_ananassae/bowtie-indexes/Drosophila_ananassae.dana_caf1.20.transcriptome.fa Dana_cHI_directRNA_20200615.fastq > Dana_cHI_directRNA_20200615.sam 2>&1 | tee Dana_cHI_directRNA_20200615.minimap.logfile.txt
/oak/stanford/groups/akundaje/marinovg/programs/minimap2-2.17_x64-linux/minimap2  -ax map-ont /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_ananassae/bowtie-indexes/Drosophila_ananassae.dana_caf1.20.transcriptome.fa Dana_wild_type_directRNA_20200615.fastq > Dana_wild_type_directRNA_20200615.sam 2>&1 | tee Dana_wild_type_directRNA_20200615.minimap.logfile.txt