/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_0 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_0-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_100 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_100-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_101 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_101-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_102 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_102-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_103 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_103-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_104 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_104-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_105 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_105-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_106 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_106-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_107 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_107-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_108 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_108-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_109 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_109-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_10 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_10-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_110 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_110-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_111 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_111-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_112 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_112-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_113 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_113-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_114 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_114-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_115 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_115-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_116 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_116-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_117 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_117-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_118 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_118-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_119 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_119-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_11 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_11-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_120 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_120-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_121 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_121-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_122 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_122-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_123 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_123-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_124 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_124-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_125 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_125-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_126 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_126-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_127 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_127-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_128 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_128-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_129 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_129-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_12 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_12-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_130 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_130-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_131 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_131-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_132 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_132-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_133 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_133-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_134 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_134-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_135 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_135-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_136 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_136-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_137 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_137-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_138 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_138-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_139 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_139-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_13 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_13-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_140 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_140-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_141 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_141-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_142 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_142-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_143 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_143-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_144 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_144-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_145 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_145-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_146 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_146-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_147 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_147-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_148 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_148-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_149 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_149-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_14 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_14-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_150 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_150-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_151 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_151-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_152 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_152-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_153 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_153-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_154 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_154-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_155 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_155-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_156 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_156-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_157 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_157-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_158 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_158-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_159 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_159-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_15 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_15-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_160 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_160-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_161 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_161-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_162 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_162-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_163 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_163-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_164 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_164-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_165 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_165-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_166 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_166-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_167 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_167-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_168 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_168-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_169 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_169-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_16 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_16-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_170 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_170-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_17 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_17-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_18 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_18-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_19 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_19-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_1 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_1-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_20 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_20-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_21 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_21-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_22 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_22-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_23 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_23-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_24 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_24-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_25 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_25-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_26 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_26-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_27 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_27-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_28 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_28-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_29 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_29-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_2 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_2-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_30 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_30-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_31 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_31-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_32 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_32-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_33 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_33-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_34 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_34-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_35 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_35-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_36 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_36-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_37 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_37-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_38 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_38-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_39 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_39-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_3 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_3-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_40 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_40-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_41 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_41-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_42 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_42-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_43 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_43-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_44 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_44-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_45 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_45-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_46 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_46-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_47 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_47-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_48 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_48-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_49 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_49-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_4 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_4-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_50 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_50-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_51 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_51-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_52 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_52-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_53 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_53-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_54 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_54-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_55 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_55-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_56 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_56-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_57 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_57-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_58 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_58-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_59 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_59-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_5 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_5-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_60 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_60-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_61 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_61-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_62 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_62-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_63 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_63-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_64 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_64-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_65 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_65-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_66 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_66-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_67 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_67-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_68 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_68-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_69 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_69-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_6 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_6-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_70 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_70-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_71 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_71-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_72 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_72-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_73 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_73-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_74 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_74-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_75 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_75-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_76 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_76-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_77 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_77-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_78 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_78-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_79 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_79-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_7 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_7-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_80 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_80-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_81 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_81-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_82 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_82-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_83 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_83-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_84 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_84-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_85 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_85-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_86 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_86-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_87 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_87-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_88 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_88-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_89 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_89-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_8 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_8-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_90 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_90-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_91 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_91-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_92 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_92-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_93 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_93-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_94 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_94-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_95 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_95-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_96 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_96-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_97 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_97-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_98 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_98-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_99 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_99-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_9 -s EMC1_24h/EMC1_24h/fast5_pass/FAJ01645_fb9385492fa1959104b100e7c0a15268bbbdac63_9-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_0 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_0-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_100 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_100-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_101 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_101-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_102 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_102-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_103 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_103-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_104 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_104-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_105 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_105-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_106 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_106-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_107 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_107-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_108 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_108-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_109 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_109-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_10 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_10-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_110 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_110-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_111 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_111-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_112 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_112-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_113 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_113-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_114 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_114-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_115 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_115-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_116 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_116-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_117 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_117-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_118 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_118-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_119 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_119-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_11 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_11-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_120 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_120-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_121 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_121-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_122 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_122-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_123 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_123-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_124 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_124-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_125 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_125-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_126 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_126-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_127 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_127-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_128 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_128-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_129 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_129-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_12 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_12-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_130 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_130-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_131 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_131-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_132 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_132-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_133 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_133-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_134 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_134-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_135 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_135-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_136 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_136-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_137 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_137-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_138 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_138-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_139 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_139-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_13 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_13-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_140 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_140-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_141 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_141-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_142 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_142-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_143 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_143-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_144 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_144-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_145 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_145-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_146 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_146-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_147 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_147-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_148 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_148-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_149 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_149-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_14 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_14-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_150 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_150-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_151 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_151-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_152 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_152-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_153 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_153-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_154 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_154-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_155 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_155-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_156 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_156-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_157 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_157-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_158 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_158-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_159 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_159-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_15 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_15-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_160 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_160-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_161 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_161-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_162 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_162-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_163 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_163-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_164 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_164-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_165 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_165-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_166 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_166-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_167 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_167-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_168 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_168-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_169 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_169-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_16 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_16-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_170 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_170-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_171 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_171-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_172 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_172-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_173 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_173-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_174 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_174-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_175 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_175-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_176 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_176-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_177 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_177-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_178 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_178-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_179 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_179-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_17 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_17-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_180 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_180-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_181 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_181-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_182 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_182-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_183 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_183-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_184 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_184-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_185 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_185-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_186 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_186-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_187 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_187-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_188 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_188-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_189 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_189-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_18 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_18-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_190 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_190-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_191 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_191-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_192 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_192-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_193 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_193-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_194 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_194-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_195 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_195-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_196 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_196-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_197 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_197-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_198 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_198-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_199 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_199-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_19 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_19-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_1 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_1-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_200 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_200-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_201 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_201-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_202 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_202-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_203 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_203-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_204 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_204-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_20 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_20-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_21 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_21-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_22 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_22-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_23 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_23-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_24 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_24-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_25 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_25-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_26 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_26-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_27 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_27-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_28 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_28-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_29 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_29-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_2 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_2-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_30 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_30-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_31 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_31-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_32 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_32-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_33 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_33-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_34 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_34-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_35 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_35-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_36 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_36-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_37 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_37-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_38 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_38-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_39 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_39-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_3 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_3-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_40 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_40-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_41 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_41-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_42 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_42-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_43 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_43-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_44 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_44-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_45 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_45-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_46 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_46-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_47 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_47-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_48 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_48-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_49 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_49-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_4 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_4-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_50 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_50-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_51 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_51-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_52 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_52-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_53 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_53-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_54 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_54-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_55 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_55-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_56 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_56-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_57 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_57-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_58 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_58-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_59 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_59-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_5 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_5-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_60 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_60-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_61 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_61-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_62 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_62-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_63 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_63-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_64 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_64-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_65 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_65-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_66 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_66-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_67 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_67-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_68 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_68-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_69 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_69-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_6 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_6-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_70 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_70-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_71 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_71-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_72 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_72-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_73 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_73-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_74 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_74-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_75 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_75-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_76 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_76-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_77 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_77-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_78 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_78-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_79 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_79-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_7 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_7-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_80 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_80-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_81 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_81-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_82 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_82-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_83 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_83-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_84 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_84-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_85 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_85-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_86 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_86-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_87 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_87-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_88 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_88-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_89 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_89-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_8 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_8-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_90 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_90-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_91 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_91-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_92 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_92-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_93 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_93-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_94 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_94-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_95 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_95-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_96 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_96-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_97 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_97-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_98 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_98-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_99 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_99-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_9 -s EMC1_24h_PAA/EMC1_24h_PAA/fast5_pass/FAK69839_75afbc82251460789b747523fbac2fcbde63bf0b_9-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_0 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_0-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_100 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_100-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_101 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_101-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_102 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_102-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_103 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_103-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_104 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_104-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_105 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_105-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_106 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_106-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_107 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_107-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_108 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_108-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_109 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_109-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_10 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_10-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_110 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_110-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_111 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_111-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_112 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_112-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_113 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_113-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_114 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_114-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_115 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_115-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_116 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_116-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_117 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_117-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_118 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_118-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_119 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_119-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_11 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_11-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_120 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_120-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_121 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_121-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_122 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_122-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_123 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_123-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_124 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_124-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_125 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_125-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_126 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_126-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_127 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_127-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_128 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_128-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_129 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_129-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_12 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_12-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_130 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_130-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_131 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_131-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_132 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_132-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_133 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_133-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_134 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_134-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_135 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_135-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_136 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_136-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_137 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_137-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_138 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_138-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_139 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_139-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_13 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_13-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_140 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_140-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_141 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_141-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_142 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_142-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_143 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_143-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_144 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_144-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_145 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_145-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_146 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_146-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_147 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_147-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_148 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_148-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_149 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_149-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_14 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_14-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_150 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_150-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_151 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_151-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_152 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_152-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_153 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_153-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_154 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_154-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_155 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_155-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_156 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_156-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_157 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_157-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_158 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_158-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_159 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_159-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_15 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_15-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_160 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_160-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_161 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_161-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_162 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_162-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_163 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_163-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_164 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_164-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_165 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_165-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_166 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_166-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_167 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_167-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_168 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_168-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_169 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_169-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_16 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_16-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_170 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_170-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_171 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_171-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_172 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_172-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_173 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_173-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_174 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_174-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_175 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_175-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_176 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_176-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_177 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_177-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_178 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_178-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_179 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_179-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_17 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_17-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_180 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_180-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_181 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_181-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_182 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_182-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_183 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_183-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_184 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_184-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_185 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_185-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_186 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_186-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_187 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_187-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_188 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_188-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_189 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_189-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_18 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_18-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_190 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_190-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_191 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_191-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_192 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_192-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_193 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_193-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_194 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_194-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_195 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_195-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_196 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_196-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_197 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_197-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_198 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_198-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_199 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_199-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_19 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_19-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_1 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_1-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_200 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_200-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_201 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_201-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_202 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_202-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_203 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_203-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_204 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_204-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_205 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_205-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_206 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_206-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_207 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_207-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_208 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_208-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_209 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_209-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_20 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_20-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_210 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_210-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_211 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_211-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_212 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_212-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_213 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_213-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_214 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_214-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_215 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_215-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_216 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_216-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_217 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_217-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_218 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_218-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_219 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_219-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_21 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_21-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_220 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_220-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_221 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_221-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_222 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_222-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_223 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_223-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_224 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_224-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_225 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_225-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_226 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_226-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_227 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_227-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_228 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_228-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_229 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_229-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_22 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_22-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_230 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_230-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_231 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_231-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_232 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_232-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_233 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_233-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_234 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_234-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_235 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_235-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_236 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_236-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_237 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_237-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_238 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_238-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_239 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_239-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_23 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_23-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_240 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_240-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_241 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_241-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_242 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_242-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_243 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_243-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_244 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_244-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_245 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_245-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_246 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_246-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_247 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_247-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_248 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_248-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_249 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_249-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_24 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_24-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_250 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_250-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_251 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_251-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_252 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_252-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_253 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_253-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_254 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_254-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_255 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_255-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_256 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_256-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_257 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_257-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_258 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_258-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_259 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_259-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_25 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_25-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_260 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_260-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_261 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_261-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_262 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_262-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_263 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_263-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_264 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_264-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_265 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_265-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_266 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_266-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_267 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_267-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_268 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_268-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_269 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_269-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_26 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_26-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_270 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_270-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_271 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_271-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_272 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_272-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_273 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_273-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_274 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_274-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_275 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_275-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_276 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_276-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_277 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_277-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_278 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_278-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_279 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_279-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_27 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_27-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_280 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_280-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_281 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_281-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_282 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_282-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_283 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_283-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_284 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_284-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_285 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_285-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_286 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_286-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_287 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_287-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_288 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_288-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_289 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_289-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_28 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_28-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_290 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_290-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_291 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_291-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_292 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_292-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_293 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_293-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_294 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_294-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_295 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_295-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_296 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_296-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_297 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_297-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_298 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_298-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_299 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_299-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_29 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_29-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_2 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_2-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_300 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_300-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_301 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_301-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_302 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_302-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_303 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_303-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_304 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_304-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_305 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_305-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_306 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_306-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_307 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_307-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_30 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_30-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_31 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_31-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_32 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_32-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_33 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_33-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_34 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_34-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_35 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_35-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_36 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_36-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_37 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_37-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_38 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_38-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_39 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_39-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_3 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_3-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_40 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_40-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_41 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_41-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_42 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_42-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_43 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_43-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_44 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_44-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_45 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_45-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_46 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_46-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_47 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_47-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_48 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_48-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_49 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_49-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_4 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_4-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_50 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_50-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_51 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_51-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_52 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_52-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_53 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_53-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_54 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_54-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_55 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_55-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_56 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_56-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_57 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_57-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_58 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_58-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_59 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_59-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_5 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_5-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_60 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_60-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_61 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_61-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_62 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_62-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_63 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_63-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_64 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_64-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_65 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_65-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_66 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_66-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_67 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_67-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_68 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_68-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_69 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_69-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_6 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_6-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_70 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_70-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_71 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_71-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_72 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_72-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_73 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_73-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_74 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_74-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_75 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_75-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_76 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_76-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_77 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_77-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_78 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_78-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_79 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_79-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_7 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_7-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_80 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_80-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_81 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_81-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_82 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_82-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_83 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_83-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_84 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_84-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_85 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_85-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_86 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_86-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_87 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_87-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_88 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_88-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_89 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_89-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_8 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_8-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_90 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_90-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_91 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_91-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_92 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_92-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_93 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_93-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_94 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_94-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_95 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_95-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_96 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_96-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_97 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_97-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_98 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_98-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_99 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_99-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.0.1_linux64/bin/guppy_basecaller -i EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_9 -s EMC1_96h/gpfs/scratch/depled01/ENA/EMC1_96h/fast5_pass/FAL50041_1b8f4b203098a79b30b7d042dbe0f5ff082f0321_9-out --cpu_threads_per_caller 20 --config rna_r9.4.1_70bps_hac.cfg --recursive --fast5_out --trim_strategy none