## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[KAS_Neuza_S2.2x36mers.dm6.unique.bam] OUTPUT=KAS_Neuza_S2.2x36mers.dm6.unique.dedup.bam METRICS_FILE=KAS_Neuza_S2.2x36mers.dm6.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sun May 16 22:27:23 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	10005897	0	0	7945615	1464050	0.794093	2095876

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.008685
2.0	1.017204
3.0	1.017276
4.0	1.017276
5.0	1.017276
6.0	1.017276
7.0	1.017276
8.0	1.017276
9.0	1.017276
10.0	1.017276
11.0	1.017276
12.0	1.017276
13.0	1.017276
14.0	1.017276
15.0	1.017276
16.0	1.017276
17.0	1.017276
18.0	1.017276
19.0	1.017276
20.0	1.017276
21.0	1.017276
22.0	1.017276
23.0	1.017276
24.0	1.017276
25.0	1.017276
26.0	1.017276
27.0	1.017276
28.0	1.017276
29.0	1.017276
30.0	1.017276
31.0	1.017276
32.0	1.017276
33.0	1.017276
34.0	1.017276
35.0	1.017276
36.0	1.017276
37.0	1.017276
38.0	1.017276
39.0	1.017276
40.0	1.017276
41.0	1.017276
42.0	1.017276
43.0	1.017276
44.0	1.017276
45.0	1.017276
46.0	1.017276
47.0	1.017276
48.0	1.017276
49.0	1.017276
50.0	1.017276
51.0	1.017276
52.0	1.017276
53.0	1.017276
54.0	1.017276
55.0	1.017276
56.0	1.017276
57.0	1.017276
58.0	1.017276
59.0	1.017276
60.0	1.017276
61.0	1.017276
62.0	1.017276
63.0	1.017276
64.0	1.017276
65.0	1.017276
66.0	1.017276
67.0	1.017276
68.0	1.017276
69.0	1.017276
70.0	1.017276
71.0	1.017276
72.0	1.017276
73.0	1.017276
74.0	1.017276
75.0	1.017276
76.0	1.017276
77.0	1.017276
78.0	1.017276
79.0	1.017276
80.0	1.017276
81.0	1.017276
82.0	1.017276
83.0	1.017276
84.0	1.017276
85.0	1.017276
86.0	1.017276
87.0	1.017276
88.0	1.017276
89.0	1.017276
90.0	1.017276
91.0	1.017276
92.0	1.017276
93.0	1.017276
94.0	1.017276
95.0	1.017276
96.0	1.017276
97.0	1.017276
98.0	1.017276
99.0	1.017276
100.0	1.017276