python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py S2_T0_ATAC-seq_rep1-GSM2521726.36mers.unique.bam SAMstats-S2_T0_ATAC-seq_rep1-GSM2521726 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py S2_T0_ATAC-seq_rep2-GSM2521727.36mers.unique.bam SAMstats-S2_T0_ATAC-seq_rep2-GSM2521727 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py S2_T0_H3K27ac_ChIP_rep1-GSM2521732.36mers.unique.bam SAMstats-S2_T0_H3K27ac_ChIP_rep1-GSM2521732 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py S2_T0_H3K27ac_ChIP_rep2-GSM2521733.36mers.unique.bam SAMstats-S2_T0_H3K27ac_ChIP_rep2-GSM2521733 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py S2_T0_H3K27ac_input_rep1-GSM2521738.36mers.unique.bam SAMstats-S2_T0_H3K27ac_input_rep1-GSM2521738 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py S2_T0_H3K27ac_input_rep2-GSM2521739.36mers.unique.bam SAMstats-S2_T0_H3K27ac_input_rep2-GSM2521739 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools