python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Pho-GSM2238595.36mers.unique.bam SAMstats-Pho-GSM2238595 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py input-GSM2238598.36mers.unique.bam SAMstats-input-GSM2238598 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools