python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MCM_S2_July_2010_extraction1_seq1_aliquote_1-GSM694120.36mers.unique.bam SAMstats-MCM_S2_July_2010_extraction1_seq1_aliquote_1-GSM694120 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MCM_S2_July_2010_extraction2_seq1_aliquote_1-GSM694121.36mers.unique.bam SAMstats-MCM_S2_July_2010_extraction2_seq1_aliquote_1-GSM694121 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MCM_S2_July_2010_extraction3_seq1_aliquote_1-GSM694122.36mers.unique.bam SAMstats-MCM_S2_July_2010_extraction3_seq1_aliquote_1-GSM694122 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools