Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=msl1_1-GSM929146.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=msl1_1-GSM929146.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=msl1_2-GSM929147.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=msl1_2-GSM929147.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=msl2_2-GSM929149.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=msl2_2-GSM929149.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=msl2_3-GSM929150.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=msl2_3-GSM929150.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=msl3_1-GSM929151.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=msl3_1-GSM929151.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=msl3_2-GSM929152.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=msl3_2-GSM929152.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=mof_1-GSM929153.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=mof_1-GSM929153.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=mof_2-GSM929154.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=mof_2-GSM929154.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=mle_1-GSM929155.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=mle_1-GSM929155.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=mle_2-GSM929156.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=mle_2-GSM929156.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=input_2-GSM929160.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=input_2-GSM929160.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=input_3-GSM929161.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=input_3-GSM929161.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=input_4-GSM929162.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=input_4-GSM929162.36mers.unique.QC