Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=CG8478_S2_cells_ChIP-seq_Input_Rep1-GSM1217655.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=CG8478_S2_cells_ChIP-seq_Input_Rep1-GSM1217655.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=CG8478_S2_cells_ChIP-seq_Input_Rep2-GSM1217656.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=CG8478_S2_cells_ChIP-seq_Input_Rep2-GSM1217656.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=CG8478_S2_cells_ChIP-seq_ChIP_Rep1-GSM1217657.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=CG8478_S2_cells_ChIP-seq_ChIP_Rep1-GSM1217657.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=CG8478_S2_cells_ChIP-seq_ChIP_Rep2-GSM1217658.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=CG8478_S2_cells_ChIP-seq_ChIP_Rep2-GSM1217658.36mers.unique.QC