python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CG8478_S2_cells_ChIP-seq_Input_Rep1-GSM1217655.36mers.unique.bam SAMstats-CG8478_S2_cells_ChIP-seq_Input_Rep1-GSM1217655 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CG8478_S2_cells_ChIP-seq_Input_Rep2-GSM1217656.36mers.unique.bam SAMstats-CG8478_S2_cells_ChIP-seq_Input_Rep2-GSM1217656 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CG8478_S2_cells_ChIP-seq_ChIP_Rep1-GSM1217657.36mers.unique.bam SAMstats-CG8478_S2_cells_ChIP-seq_ChIP_Rep1-GSM1217657 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CG8478_S2_cells_ChIP-seq_ChIP_Rep2-GSM1217658.36mers.unique.bam SAMstats-CG8478_S2_cells_ChIP-seq_ChIP_Rep2-GSM1217658 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools