/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t Ct_CP190-GSM1015404.36mers.unique.bam -c Ct_input-GSM1015412.36mers.unique.bam -n Ct_CP190-GSM1015404.36mers.unique.MACS-2.1.0 -g dm -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t Ct_dCTCF-GSM1015410.36mers.unique.bam -c Ct_input-GSM1015412.36mers.unique.bam -n Ct_dCTCF-GSM1015410.36mers.unique.MACS-2.1.0 -g dm -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t Ct_Mod-GSM1015408.36mers.unique.bam -c Ct_input-GSM1015412.36mers.unique.bam -n Ct_Mod-GSM1015408.36mers.unique.MACS-2.1.0 -g dm -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t Ct_Su_Hw-GSM1015406.36mers.unique.bam -c Ct_input-GSM1015412.36mers.unique.bam -n Ct_Su_Hw-GSM1015406.36mers.unique.MACS-2.1.0 -g dm -f BAM
 