Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=dMyc_S2-DRSC_late_embryonic_D.melanogaster_Input-GSM1296166.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=dMyc_S2-DRSC_late_embryonic_D.melanogaster_Input-GSM1296166.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=dMyc_S2-DRSC_late_embryonic_D.melanogaster_ChIP_Rep1-GSM1296167.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=dMyc_S2-DRSC_late_embryonic_D.melanogaster_ChIP_Rep1-GSM1296167.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=dMyc_S2-DRSC_late_embryonic_D.melanogaster_ChIP_Rep2-GSM1296168.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=dMyc_S2-DRSC_late_embryonic_D.melanogaster_ChIP_Rep2-GSM1296168.36mers.unique.QC