python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_MSL2_S2_rep4-GSM2469514.36mers.unique.bam SAMstats-ChIP_MSL2_S2_rep4-GSM2469514 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_MSL2_S2_rep3-GSM2469512.36mers.unique.bam SAMstats-ChIP_MSL2_S2_rep3-GSM2469512 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_MSL2_S2_rep2-GSM2469510.36mers.unique.bam SAMstats-ChIP_MSL2_S2_rep2-GSM2469510 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_MSL2_S2_rep1-GSM2469507.36mers.unique.bam SAMstats-ChIP_MSL2_S2_rep1-GSM2469507 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_Input_S2_rep4-GSM2469513.36mers.unique.bam SAMstats-ChIP_Input_S2_rep4-GSM2469513 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_Input_S2_rep3-GSM2469511.36mers.unique.bam SAMstats-ChIP_Input_S2_rep3-GSM2469511 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_Input_S2_rep2-GSM246950.36mers.unique.bam SAMstats-ChIP_Input_S2_rep2-GSM246950 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_Input_S2_rep1-GSM2469506.36mers.unique.bam SAMstats-ChIP_Input_S2_rep1-GSM2469506 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ChIP_H4K16ac_S2_rep1-GSM2469508.36mers.unique.bam SAMstats-ChIP_H4K16ac_S2_rep1-GSM2469508 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools