Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=dCAP-D3_ChIP_1-GSM1919990.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=dCAP-D3_ChIP_1-GSM1919990.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=dCAP-D3_ChIP_2-GSM1919993.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=dCAP-D3_ChIP_2-GSM1919993.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=IgG_ChIP_1-GSM1919989.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=IgG_ChIP_1-GSM1919989.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=IgG_ChIP_2-GSM1919992.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=IgG_ChIP_2-GSM1919992.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Input_1-GSM1919988.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Input_1-GSM1919988.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Input_2-GSM1919991.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Input_2-GSM1919991.36mers.unique.QC