Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Yki_S2_ChIP_rep2-GSM1128468.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Yki_S2_ChIP_rep2-GSM1128468.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Yki_S2_ChIP_rep1-GSM1128467.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Yki_S2_ChIP_rep1-GSM1128467.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Yki_S2_ChIP_input-GSM1128469.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Yki_S2_ChIP_input-GSM1128469.36mers.unique.QC