python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CP190-input-GSM1277519.36mers.unique.bam SAMstats-CP190-input-GSM1277519 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CP190-mut-GSM1277520.36mers.unique.bam SAMstats-CP190-mut-GSM1277520 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CP190-WT1-GSM1277517.36mers.unique.bam SAMstats-CP190-WT1-GSM1277517 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py CP190-WT2-GSM1277518.36mers.unique.bam SAMstats-CP190-WT2-GSM1277518 -bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools