cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== AtoC_EB-GSM1662005.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes AtoC_EB-GSM1662005.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== DnaA1_72h-GSM1662007.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes DnaA1_72h-GSM1662007.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== DnaA3_24h-GSM1662006.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes DnaA3_24h-GSM1662006.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Euo_72h-GSM1662000.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes Euo_72h-GSM1662000.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HrcA_72h-GSM1661998.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes HrcA_72h-GSM1661998.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== NrdR_EB-GSM1662004.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes NrdR_EB-GSM1662004.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== ParB_EB-GSM1662003.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes ParB_EB-GSM1662003.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== PhoB_EB-GSM1662001.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes PhoB_EB-GSM1662001.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Wcw_1223_56h-GSM1662002.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes Wcw_1223_56h-GSM1662002.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Wcw_1671_EB-GSM1661999.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes Wcw_1671_EB-GSM1661999.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== AtoC_EB-GSM1662005.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes AtoC_EB-GSM1662005.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== DnaA1_72h-GSM1662007.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes DnaA1_72h-GSM1662007.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== DnaA3_24h-GSM1662006.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes DnaA3_24h-GSM1662006.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Euo_72h-GSM1662000.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes Euo_72h-GSM1662000.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HrcA_72h-GSM1661998.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes HrcA_72h-GSM1661998.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== NrdR_EB-GSM1662004.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes NrdR_EB-GSM1662004.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== ParB_EB-GSM1662003.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes ParB_EB-GSM1662003.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== PhoB_EB-GSM1662001.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes PhoB_EB-GSM1662001.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Wcw_1223_56h-GSM1662002.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes Wcw_1223_56h-GSM1662002.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Wcw_1671_EB-GSM1661999.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes Wcw_1671_EB-GSM1661999.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &